Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.7e-52 208.4 103 100.0
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.3e-43 179.5 103 87.4
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.7e-43 179.1 103 86.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.8e-33 145.2 98 69.4
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.4e-32 142.9 103 67.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 3.1e-32 141.7 101 68.3
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 3.1e-32 141.7 102 68.6
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 4.0e-32 141.4 97 70.1
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 5.2e-32 141.0 85 77.6
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 6.8e-32 140.6 93 75.3
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 8.9e-32 140.2 97 68.0
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.5e-31 139.4 102 68.6
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.0e-31 139.0 90 74.4
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 3.4e-31 138.3 100 68.0
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 4.4e-31 137.9 86 76.7
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 7.5e-31 137.1 94 72.3
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.3e-30 136.3 102 62.7
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.7e-30 136.0 103 65.0
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.7e-30 136.0 97 70.1
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.7e-30 136.0 86 75.6
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 2.9e-30 135.2 84 77.4
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 3.7e-30 134.8 90 71.1
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.7e-30 134.8 97 68.0
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.7e-30 134.8 97 68.0
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 3.7e-30 134.8 87 74.7
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 4.9e-30 134.4 101 64.4
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 6.4e-30 134.0 86 74.4
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 6.4e-30 134.0 84 77.4
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 6.4e-30 134.0 99 66.7
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 8.3e-30 133.7 90 71.1
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 8.3e-30 133.7 100 66.0
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 8.3e-30 133.7 86 74.4
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 8.3e-30 133.7 97 67.0
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.4e-29 132.9 94 68.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.9e-29 132.5 91 70.3
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.9e-29 132.5 86 73.3
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.9e-29 132.5 86 73.3
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.4e-29 132.1 92 66.3
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 3.2e-29 131.7 88 70.5
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 4.1e-29 131.3 87 73.6
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 4.1e-29 131.3 86 69.8
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.1e-29 131.3 103 61.2
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 5.4e-29 131.0 103 64.1
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 7.1e-29 130.6 90 72.2
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 9.2e-29 130.2 90 70.0
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 9.2e-29 130.2 91 68.1
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.2e-28 129.8 95 67.4
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.2e-28 129.8 91 65.9
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 1.6e-28 129.4 92 67.4
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.6e-28 129.4 90 67.8
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.6e-28 129.4 92 67.4
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.6e-28 127.9 92 65.2
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 4.6e-28 127.9 85 70.6
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.0e-28 127.5 91 67.0
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 7.8e-28 127.1 81 74.1
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 7.8e-28 127.1 92 65.2
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 7.8e-28 127.1 92 65.2
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 7.8e-28 127.1 84 70.2
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.0e-27 126.7 92 64.1
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.0e-27 126.7 92 64.1
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.0e-27 126.7 84 71.4
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.0e-27 126.7 95 65.3
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.0e-27 126.7 93 68.8
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.3e-27 126.3 95 66.3
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.7e-27 125.9 95 63.2
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.7e-27 125.9 97 60.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.7e-27 125.9 102 59.8
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.7e-27 125.9 87 70.1
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.7e-27 125.9 84 69.0
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 2.3e-27 125.6 84 69.0
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.0e-27 125.2 86 68.6
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 3.0e-27 125.2 93 68.8
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 3.9e-27 124.8 95 63.2
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 5.1e-27 124.4 84 69.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 6.6e-27 124.0 86 67.4
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 6.6e-27 124.0 89 67.4
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 8.6e-27 123.6 91 62.6
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 1.1e-26 123.2 91 61.5
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.9e-26 122.5 95 61.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 2.5e-26 122.1 87 69.0
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 3.3e-26 121.7 95 64.2
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 4.3e-26 121.3 87 64.4
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.3e-26 120.6 95 60.0
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.2e-25 119.8 97 61.9
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.6e-25 119.4 95 63.2
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.1e-25 119.0 91 63.7
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 2.8e-25 118.6 87 65.5
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 8.1e-25 117.1 82 68.3
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 5.2e-24 114.4 87 64.4
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.2e-24 114.4 87 64.4
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.2e-24 114.4 87 64.4
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 1.2e-23 113.2 81 65.4
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 1.2e-23 113.2 82 64.6
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 3.4e-23 111.7 85 62.4
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 4.4e-23 111.3 83 63.9
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.7e-22 109.4 81 66.7
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 3.2e-21 105.1 89 55.1
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 5.4e-21 104.4 83 59.0
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 2.1e-20 102.4 64 81.2
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 2.7e-20 102.1 69 68.1
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.7e-19 99.4 67 71.6
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.1e-17 92.4 61 75.4
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 3.6e-17 91.7 64 71.9
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 4.8e-17 91.3 57 73.7
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.8e-16 89.4 73 58.9
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 2.4e-16 89.0 61 73.8
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 5.3e-16 87.8 82 46.3
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 3.4e-15 85.1 81 48.1
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 8.4e-14 80.5 82 45.1
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 6.0e-12 74.3 57 63.2
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.6e-09 66.2 55 70.9
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.1e-08 62.0 56 66.1
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 3.4e-07 58.5 48 54.2


User provided reference genes

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