Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 1.6e-62 242.7 126 100.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 7.1e-31 137.5 126 58.7
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 8.7e-21 104.0 121 43.8
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 5.6e-20 101.3 131 43.5
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 1.3e-19 100.1 118 42.4
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 2.1e-19 99.4 133 45.9
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.4e-18 96.7 112 49.1
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 4.0e-18 95.1 112 48.2
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 5.3e-18 94.7 130 40.8
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 5.3e-18 94.7 124 46.0
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 5.3e-18 94.7 124 46.0
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 5.3e-18 94.7 133 42.9
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 6.9e-18 94.4 109 50.5
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 9.0e-18 94.0 119 43.7
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 4.4e-17 91.7 120 43.3
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 9.9e-17 90.5 120 41.7
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 1.3e-16 90.1 109 48.6
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.7e-16 89.7 124 41.9
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 3.8e-16 88.6 124 41.9
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 4.9e-16 88.2 127 43.3
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 6.4e-16 87.8 120 40.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.1e-15 87.0 129 41.9
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 1.4e-15 86.7 105 46.7
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 6.0e-14 81.3 121 40.5
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 7.9e-14 80.9 127 38.6
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 1.5e-12 76.6 117 39.3
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 1.5e-12 76.6 116 36.2
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.5e-12 75.9 119 38.7
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 2.5e-12 75.9 124 39.5
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 7.4e-12 74.3 95 46.3
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 9.6e-12 73.9 118 38.1
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 6.2e-11 71.2 117 36.8
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 1.4e-10 70.1 124 37.1
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 9.0e-10 67.4 113 38.1
Nn4g22593 Nelumbo nucifera HOM05D008921 ORTHO05D010506 1.2e-09 67.0 129 37.2
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.0e-09 66.2 120 35.0
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 4.5e-09 65.1 119 34.5
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 1.3e-08 63.5 91 44.0
QL10p006881 Quercus lobata HOM05D008921 ORTHO05D010506 1.7e-08 63.2 115 36.5
CAN.G338.33 Capsicum annuum HOM05D012681 ORTHO05D010506 4.9e-08 61.6 125 34.4
Migut.D02001 Erythranthe guttata HOM05D024513 ORTHO05D010506 4.9e-08 61.6 90 43.3
Potri.012G085901 Populus trichocarpa HOM05D008921 ORTHO05D010506 1.4e-07 60.1 116 33.6
Nitab4.5_0001793g0030 Nicotiana tabacum HOM05D016190 ORTHO05D017486 2.4e-07 59.3 126 36.5
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 3.2e-07 58.9 126 37.3
Phvul.003G205100 Phaseolus vulgaris HOM05D010415 ORTHO05D013002 4.2e-07 58.5 112 33.9
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 5.5e-07 58.2 116 30.2
Glyma.17G084600 Glycine max HOM05D010415 ORTHO05D013002 7.1e-07 57.8 112 36.6
Actinidia08131 Actinidia chinensis HOM05D021476 ORTHO05D016437 9.3e-07 57.4 111 37.8
TPR.G40149 Trifolium pratense HOM05D010415 ORTHO05D013002 1.2e-06 57.0 113 33.6
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 1.6e-06 56.6 112 31.2
Aqoxy3G01239 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 3.5e-06 55.5 110 36.4
DCAR_026174 Daucus carota HOM05D039555 ORTHO05D035023 3.5e-06 55.5 83 33.7
MSTRG.9692 Avicennia marina HOM05D024513 ORTHO05D010506 4.6e-06 55.1 114 32.5
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 4.6e-06 55.1 116 30.2
QL07p048894 Quercus lobata HOM05D008921 ORTHO05D010506 4.6e-06 55.1 39 59.0


User provided reference genes

Program Settings