Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048179 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D110740 2.4e-47 191.8 95 100.0
Dinv25988 Davidia involucrata HOM05D000001 ORTHO05D000003 2.0e-14 82.4 53 77.4
Actinidia07716 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.0e-13 80.1 53 73.6
PGR044G1491 Punica granatum HOM05D000001 ORTHO05D000003 3.8e-13 78.2 53 73.6
GSVIVG01016592001 Vitis vinifera HOM05D000001 ORTHO05D000003 5.0e-13 77.8 53 71.7
TWI15G0255 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 2.1e-11 72.4 49 69.4
Nn2g14051 Nelumbo nucifera HOM05D000001 ORTHO05D000003 4.7e-11 71.2 50 68.0
TAR623G0408 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.4e-10 69.7 53 66.0
PSO585G0035 Papaver somniferum HOM05D000001 ORTHO05D000003 1.2e-09 66.6 49 65.3
MBI05_g36632_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D244018 5.7e-09 64.3 49 65.3
Manes.14G156200 Manihot esculenta HOM05D000001 ORTHO05D010426 7.0e-07 57.4 49 55.1
Oeu018415.1 Olea europaea HOM05D000001 ORTHO05D000003 1.6e-06 56.2 48 58.3
Eucgr.F02893 Eucalyptus grandis HOM05D000001 ORTHO05D010426 2.7e-06 55.5 50 52.0
Thhalv10005782m.g Eutrema salsugineum HOM05D000001 ORTHO05D000003 2.7e-06 55.5 47 57.4
Rhsim13G0134600 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.5e-06 54.7 46 56.5
RhsimUnG0177500 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.5e-06 54.7 46 56.5
BcaC07g40384 Brassica carinata HOM05D000001 ORTHO05D000003 5.9e-06 54.3 47 55.3
A09p50310 Brassica napus HOM05D000001 ORTHO05D000003 5.9e-06 54.3 47 55.3
C08p32840 Brassica napus HOM05D000001 ORTHO05D000003 5.9e-06 54.3 47 55.3
BolC8t50895H Brassica oleracea HOM05D000001 ORTHO05D000003 5.9e-06 54.3 47 55.3
BraA09t40483Z Brassica rapa HOM05D000001 ORTHO05D000003 5.9e-06 54.3 47 55.3
CiPaw.03G163900 Carya illinoinensis HOM05D000001 ORTHO05D000003 7.8e-06 53.9 48 54.2
Gohir.A04G005300 Gossypium hirsutum HOM05D000001 ORTHO05D000003 7.8e-06 53.9 49 51.0
Gohir.D05G384400 Gossypium hirsutum HOM05D000001 ORTHO05D000003 7.8e-06 53.9 49 51.0
Gorai.009G451200 Gossypium raimondii HOM05D000001 ORTHO05D000003 7.8e-06 53.9 49 51.0


User provided reference genes

Program Settings