Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 7.2e-57 223.8 121 100.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.5e-38 160.6 124 75.8
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 5.0e-34 147.9 126 72.2
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 6.6e-34 147.5 124 70.2
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.5e-33 146.4 126 71.4
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.3e-33 144.8 126 71.4
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 7.3e-33 144.1 124 70.2
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 9.5e-33 143.7 121 66.9
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 1.2e-32 143.3 124 64.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 4.7e-32 141.4 128 66.4
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.4e-31 139.8 110 71.8
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.4e-31 139.8 123 69.1
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.3e-31 139.0 126 65.9
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 3.0e-31 138.7 111 71.2
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.2e-31 137.9 120 66.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.2e-31 137.9 120 66.7
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 6.8e-31 137.5 123 69.1
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.8e-31 137.5 120 66.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 1.2e-30 136.7 123 66.7
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.5e-30 136.3 120 66.7
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.6e-30 135.6 124 65.3
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 3.4e-30 135.2 121 65.3
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.4e-30 135.2 124 66.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 5.7e-30 134.4 119 68.1
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 7.5e-30 134.0 122 64.8
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 9.8e-30 133.7 124 63.7
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 9.8e-30 133.7 119 68.9
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.7e-29 132.9 123 61.8
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.9e-29 132.1 123 65.9
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.9e-29 132.1 121 62.8
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.7e-29 131.7 102 72.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 4.9e-29 131.3 121 64.5
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.4e-29 131.0 118 65.3
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.4e-29 131.0 118 65.3
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 8.3e-29 130.6 124 62.9
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.1e-28 130.2 125 64.8
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.4e-28 129.8 121 64.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.4e-28 129.8 121 62.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.8e-28 129.4 126 65.1
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.8e-28 129.4 126 65.1
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.8e-28 129.4 140 60.7
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.4e-28 129.0 125 61.6
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.4e-28 129.0 122 62.3
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.4e-28 129.0 120 65.0
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 3.2e-28 128.6 121 61.2
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 3.2e-28 128.6 129 62.0
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.1e-28 128.3 123 63.4
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 4.1e-28 128.3 123 62.6
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 5.4e-28 127.9 123 64.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 2.0e-27 125.9 121 63.6
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 2.7e-27 125.6 123 62.6
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 3.5e-27 125.2 126 61.9
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 4.6e-27 124.8 123 57.7
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 5.9e-27 124.4 123 62.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.7e-26 122.9 125 60.8
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.3e-26 122.5 129 60.5
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 3.0e-26 122.1 119 58.8
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 3.9e-26 121.7 116 62.9
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 5.0e-26 121.3 125 60.0
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 5.0e-26 121.3 111 69.4
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 6.6e-26 120.9 123 59.3
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 8.6e-26 120.6 120 57.5
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 8.6e-26 120.6 95 67.4
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.1e-25 120.2 125 60.8
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 62.7
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.9e-25 119.4 121 62.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 2.5e-25 119.0 122 59.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.5e-25 119.0 120 64.2
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.5e-25 119.0 118 63.6
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.3e-25 118.6 125 60.0
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 4.3e-25 118.2 106 67.9
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 5.6e-25 117.9 119 58.8
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 5.6e-25 117.9 125 60.0
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.6e-24 116.3 125 59.2
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 3.6e-24 115.2 113 60.2
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 6.2e-24 114.4 120 61.7
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.2e-24 114.4 67 80.6
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.0e-23 113.6 69 73.9
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.0e-23 113.6 123 53.7
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.3e-23 112.5 113 59.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.3e-23 112.5 109 66.1
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 5.2e-23 111.3 125 58.4
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 3.4e-22 108.6 124 56.5
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 7.5e-22 107.5 101 65.3
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 4.9e-21 104.8 120 56.7
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 8.3e-21 104.0 65 70.8
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.1e-20 103.6 110 62.7
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.4e-20 102.4 120 54.2
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 3.2e-20 102.1 90 66.7
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 5.4e-20 101.3 122 54.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 9.2e-20 100.5 121 52.9
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.0e-19 99.4 67 73.1
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.0e-19 99.4 67 73.1
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 2.7e-19 99.0 73 63.0
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.5e-19 98.6 125 55.2
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 6.0e-19 97.8 90 60.0
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 7.8e-19 97.4 102 53.9
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 6.6e-18 94.4 105 56.2
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.9e-17 92.8 112 53.6
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 3.3e-17 92.0 82 62.2
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 3.3e-17 92.0 125 54.4
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 3.3e-17 92.0 124 54.0
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 3.3e-17 92.0 101 54.5
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 2.1e-16 89.4 109 58.7
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 8.1e-16 87.4 124 53.2
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-15 86.7 96 56.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.3e-15 85.9 113 48.7
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.8e-14 81.3 96 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.2e-13 79.3 113 44.2
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.6e-11 71.6 71 54.9
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 6.6e-10 67.8 119 42.9
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 3.3e-09 65.5 117 51.3
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 9.5e-09 63.9 88 50.0
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 3.6e-08 62.0 103 44.7
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.0e-07 58.5 66 51.5


User provided reference genes

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