Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 3.3e-181 638.3 326 100.0
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.2e-151 540.0 326 83.7
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 6.9e-147 524.2 327 82.9
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 7.7e-146 520.8 330 82.4
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 5.5e-144 514.6 328 80.2
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 1.5e-136 490.0 328 78.0
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 8.2e-132 474.2 324 74.4
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 7.0e-131 471.1 326 77.3
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 5.0e-129 464.9 321 73.5
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 1.2e-127 460.3 325 71.7
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 2.7e-127 459.1 310 73.5
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 8.0e-127 457.6 319 72.7
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 4.0e-126 455.3 322 71.7
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 2.0e-125 453.0 322 72.4
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 2.0e-125 453.0 317 72.6
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 2.0e-125 453.0 324 70.7
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 4.4e-125 451.8 317 71.3
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 9.8e-125 450.7 321 71.0
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 1.7e-124 449.9 331 67.7
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 1.7e-124 449.9 313 72.5
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.7e-124 448.7 309 72.8
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 8.3e-124 447.6 313 72.2
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 1.4e-123 446.8 317 70.7
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 1.8e-123 446.4 305 73.1
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 3.1e-123 445.7 324 70.1
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 3.1e-123 445.7 318 72.3
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 4.1e-123 445.3 320 70.0
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 4.1e-123 445.3 351 67.2
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 5.4e-123 444.9 304 73.0
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 9.1e-123 444.1 325 66.5
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.2e-122 443.7 324 70.7
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 1.6e-122 443.4 314 72.0
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 2.0e-122 443.0 314 73.2
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 4.5e-122 441.8 326 69.6
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 4.5e-122 441.8 321 71.0
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 5.9e-122 441.4 323 69.7
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 7.7e-122 441.0 313 73.2
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 1.0e-121 440.7 332 69.3
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 1.3e-121 440.3 321 68.8
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 2.3e-121 439.5 331 66.2
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 3.8e-121 438.7 323 69.3
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 5.0e-121 438.3 324 68.8
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 5.0e-121 438.3 324 68.5
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 6.5e-121 438.0 313 71.2
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 1.5e-120 436.8 321 68.8
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 1.9e-120 436.4 321 68.5
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 1.9e-120 436.4 311 69.8
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 4.2e-120 435.3 321 67.0
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 7.2e-120 434.5 326 68.7
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 7.2e-120 434.5 326 69.0
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 9.5e-120 434.1 320 69.4
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 1.2e-119 433.7 313 71.6
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 1.6e-119 433.3 319 68.0
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 3.6e-119 432.2 312 70.5
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 4.7e-119 431.8 320 68.1
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 1.4e-118 430.3 326 66.9
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 1.8e-118 429.9 349 65.0
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 1.8e-118 429.9 324 67.3
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 3.0e-118 429.1 324 67.3
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 6.8e-118 427.9 325 68.3
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 1.5e-117 426.8 322 68.0
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 7.5e-117 424.5 324 68.5
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 9.8e-117 424.1 323 68.1
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 8.3e-116 421.0 323 66.3
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 1.8e-115 419.9 325 66.8
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.8e-115 419.9 326 65.3
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 2.4e-115 419.5 320 67.2
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 2.4e-115 419.5 394 58.9
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.1e-115 419.1 351 61.5
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 7.0e-115 417.9 321 67.0
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.2e-114 417.2 350 64.6
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 3.5e-114 415.6 348 64.1
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 4.5e-114 415.2 305 69.8
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 5.9e-114 414.8 368 60.9
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 1.7e-113 413.3 273 77.3
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 2.3e-113 412.9 312 66.0
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 2.9e-113 412.5 312 66.7
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 5.0e-113 411.8 322 65.8
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.5e-112 410.2 338 64.5
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.9e-112 409.8 323 65.9
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 3.3e-112 409.1 312 66.3
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 7.3e-112 407.9 321 64.8
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 9.5e-112 407.5 322 65.5
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 2.8e-111 406.0 275 74.2
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 8.9e-110 401.0 311 65.6
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 7.5e-109 397.9 268 74.3
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 1.7e-108 396.7 309 64.4
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 2.2e-108 396.4 268 73.5
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 3.7e-108 395.6 268 72.8
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 8.3e-108 394.4 273 73.3
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 4.1e-107 392.1 311 62.7
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 7.0e-107 391.3 308 66.6
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 1.2e-106 390.6 311 63.0
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 1.6e-106 390.2 277 71.8
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 1.6e-106 390.2 311 63.3
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 2.7e-106 389.4 311 63.3
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 4.6e-106 388.7 311 64.0
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 3.0e-105 386.0 311 66.2
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 6.6e-105 384.8 311 63.0
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 8.6e-105 384.4 294 66.3
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.9e-104 383.3 324 64.2
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 3.3e-104 382.5 321 62.3
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 2.1e-103 379.8 308 63.0
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 1.1e-102 377.5 318 61.9
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 1.1e-102 377.5 337 59.3
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.8e-102 376.7 306 61.8
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 8.9e-102 374.4 311 61.1
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 8.9e-102 374.4 327 60.2
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 1.5e-101 373.6 311 61.4
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 4.4e-101 372.1 324 61.1
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 3.7e-100 369.0 265 71.3
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 6.4e-100 368.2 311 60.5
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 5.4e-99 365.2 308 62.0
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 6.0e-98 361.7 309 60.2
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 3.9e-97 359.0 311 61.4
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 6.6e-97 358.2 303 58.4
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 4.3e-96 355.5 247 69.6
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 2.1e-95 353.2 244 70.1
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.6e-95 352.4 325 59.1
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 3.6e-95 352.4 308 59.4
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 9.2e-91 337.8 312 56.1
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 3.0e-89 332.8 313 57.2
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.1e-86 322.8 322 55.6
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 6.6e-81 305.1 227 69.2
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 8.4e-76 288.1 233 60.5
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.3e-73 280.8 458 41.5
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 1.7e-73 280.4 308 51.3
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 3.3e-72 276.2 201 67.7
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 7.6e-69 265.0 311 50.5
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 2.7e-66 256.5 178 73.6
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 7.9e-66 255.0 173 75.1
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 3.0e-65 253.1 183 68.9
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 9.6e-64 248.1 216 62.0
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 5.3e-62 242.3 211 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 1.4e-59 234.2 197 59.4
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.4e-59 233.4 156 71.2
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 5.5e-59 232.3 172 70.9
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 5.5e-59 232.3 221 53.4
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 2.3e-57 226.9 189 61.4
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 5.1e-57 225.7 352 40.3
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 5.1e-57 225.7 273 50.5
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.9e-56 223.8 248 52.4
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 5.6e-56 222.2 307 44.0
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 9.0e-54 214.9 151 72.8
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 4.5e-53 212.6 174 62.6
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 4.9e-52 209.1 182 64.8
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 5.5e-51 205.7 291 41.6
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 1.0e-49 201.4 140 75.0
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 4.1e-46 189.5 218 49.5
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 9.0e-46 188.3 132 71.2
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.6e-45 186.8 196 54.6
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 1.1e-43 181.4 134 65.7
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 1.5e-40 171.0 312 40.1
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 2.2e-39 167.2 182 46.2
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 1.1e-38 164.9 118 66.9
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 4.1e-38 162.9 117 66.7
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.5e-37 161.0 149 57.0
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.2e-34 151.4 177 49.2
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 3.4e-29 133.3 106 67.0
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.9e-27 127.5 137 52.6
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 4.2e-27 126.3 114 57.9
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 1.2e-26 124.8 132 56.8
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 6.7e-25 119.0 129 48.1
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.6e-18 97.8 66 71.2
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 2.1e-18 97.4 85 61.2
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 7.5e-16 89.0 76 61.8
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 3.7e-15 86.7 89 56.2
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 1.2e-13 81.6 62 67.7
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 1.3e-12 78.2 62 67.7
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.8e-12 76.6 91 46.2
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 3.8e-12 76.6 83 48.2
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.5e-11 74.7 45 80.0
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 3.1e-06 57.0 53 56.6


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