Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 4.1e-192 674.5 321 100.0
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 5.8e-154 547.7 348 76.7
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 5.8e-154 547.7 348 76.4
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.5e-141 505.8 348 69.5
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 9.6e-141 503.8 337 73.9
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.8e-140 502.3 347 69.2
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 1.1e-139 500.4 351 68.4
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 1.4e-139 500.0 349 70.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 9.0e-139 497.3 349 67.3
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 8.4e-137 490.7 348 68.1
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 1.1e-136 490.3 345 69.9
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.9e-136 489.6 347 68.0
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.2e-136 488.8 345 69.6
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 7.1e-136 487.6 348 67.0
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 7.1e-136 487.6 345 67.2
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.7e-135 485.7 345 69.3
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 3.5e-135 485.3 345 68.7
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.6e-135 485.0 345 69.0
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 1.3e-134 483.4 343 67.9
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 3.0e-134 482.3 349 66.8
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.9e-134 481.9 345 68.7
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 3.9e-134 481.9 347 66.6
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 8.7e-134 480.7 347 65.4
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 1.1e-133 480.3 350 67.1
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 1.9e-133 479.6 348 66.7
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 4.3e-133 478.4 348 67.0
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.3e-133 477.6 347 66.0
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 9.6e-133 477.2 349 65.6
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 1.3e-132 476.9 343 66.2
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 3.6e-132 475.3 341 67.2
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 1.1e-131 473.8 346 65.6
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 1.1e-131 473.8 347 66.9
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 9.0e-131 470.7 344 64.8
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 1.5e-130 469.9 343 65.3
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.5e-130 469.9 349 66.2
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.5e-130 469.9 369 62.3
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.5e-130 469.9 347 65.4
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 2.0e-130 469.5 348 65.2
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 2.6e-130 469.2 346 64.2
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 2.6e-130 469.2 348 65.5
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 3.4e-130 468.8 344 64.2
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 4.5e-130 468.4 344 65.4
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 5.8e-130 468.0 343 66.2
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 1.7e-129 466.5 347 65.7
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 1.7e-129 466.5 343 64.7
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 2.2e-129 466.1 342 66.4
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 4.9e-129 464.9 330 67.9
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 6.4e-129 464.5 336 66.7
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 8.4e-129 464.2 348 64.9
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 2.4e-128 462.6 348 64.1
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 7.1e-128 461.1 344 63.7
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.2e-127 460.3 346 63.3
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.2e-127 460.3 344 63.7
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.2e-127 460.3 346 63.3
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 2.1e-127 459.5 344 63.7
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 3.5e-127 458.8 343 64.7
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 2.3e-126 456.1 343 64.1
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 3.0e-126 455.7 347 63.7
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 3.9e-126 455.3 349 61.6
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 5.1e-126 454.9 347 62.5
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 1.1e-125 453.8 343 63.8
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 1.1e-125 453.8 336 65.8
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.1e-125 453.8 350 62.9
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.9e-125 453.0 347 64.6
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 4.3e-125 451.8 347 62.2
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 4.8e-124 448.4 349 61.6
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 4.8e-124 448.4 316 69.0
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 8.1e-124 447.6 344 63.7
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 6.9e-123 444.5 349 62.5
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.5e-122 443.4 346 62.1
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 5.8e-122 441.4 343 63.0
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 7.6e-122 441.0 345 63.2
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.7e-121 439.9 349 61.9
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.2e-121 439.5 346 61.8
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 3.8e-121 438.7 350 60.0
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.4e-120 436.8 348 59.5
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 5.1e-118 428.3 323 68.7
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.1e-118 428.3 348 58.3
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 8.7e-118 427.6 349 58.2
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 8.7e-118 427.6 348 57.5
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 1.1e-117 427.2 348 57.8
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.9e-117 426.4 331 63.1
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 2.5e-117 426.0 345 59.7
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 7.4e-117 424.5 349 58.2
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 7.4e-117 424.5 333 63.4
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.3e-116 423.7 349 57.9
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 1.6e-116 423.3 348 57.5
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 1.6e-116 423.3 348 57.5
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.6e-116 423.3 346 56.6
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 2.1e-116 422.9 348 57.2
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 3.7e-116 422.2 323 63.8
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 4.8e-116 421.8 349 57.6
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 3.1e-115 419.1 348 56.9
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 2.6e-114 416.0 348 56.6
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 1.0e-113 414.1 285 68.1
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 3.8e-113 412.1 347 57.1
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 3.8e-113 412.1 285 67.7
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 1.1e-112 410.6 378 53.7
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.9e-112 409.8 361 56.0
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 3.0e-110 402.5 322 60.2
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.5e-109 399.4 351 55.3
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 4.8e-108 395.2 323 60.1
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.0e-102 377.5 316 58.5
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 4.3e-101 372.1 350 51.7
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 3.4e-98 362.5 336 54.5
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.4e-98 362.5 320 56.2
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 5.5e-96 355.1 373 49.9
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 3.5e-90 335.9 332 50.6
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.0e-89 334.3 325 55.1
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 3.8e-89 332.4 267 59.6
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 5.2e-86 322.0 246 64.6
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 7.4e-85 318.2 256 61.7
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 1.8e-83 313.5 349 44.1
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 7.7e-82 308.1 234 67.1
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 1.5e-80 303.9 234 67.1
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.1e-79 300.1 222 64.9
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.6e-77 293.1 269 56.5
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.7e-68 263.8 347 39.2
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.1e-56 224.6 336 37.5
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.8e-54 217.2 161 65.8
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.6e-47 194.1 146 63.0
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 1.4e-46 191.0 165 57.6
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.1e-43 179.5 157 55.4
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 5.4e-43 179.1 326 32.2
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.2e-42 177.9 133 65.4
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 6.4e-36 155.6 109 66.1
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.0e-29 134.0 192 44.8
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 3.8e-20 103.2 79 68.4
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 6.4e-20 102.4 135 38.5
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.3e-17 94.0 79 54.4
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 6.2e-15 85.9 99 44.4
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.4e-11 73.9 71 47.9
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.2e-11 73.6 47 57.4


User provided reference genes

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