Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.1e-152 542.3 284 100.0
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.2e-148 528.1 284 96.8
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.7e-125 453.0 284 83.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-123 446.8 284 80.3
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.0e-123 444.1 284 79.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.2e-113 413.7 342 67.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.1e-111 407.1 275 76.0
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 5.4e-111 404.8 278 76.6
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 7.0e-111 404.4 267 76.0
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.0e-110 402.9 273 75.5
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.7e-110 402.5 269 75.8
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.5e-110 402.1 275 74.5
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 4.5e-110 401.7 266 75.9
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.3e-109 400.2 278 74.1
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.2e-109 399.4 276 74.6
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 3.8e-109 398.7 279 72.4
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 6.5e-109 397.9 264 75.4
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.1e-108 397.1 280 71.4
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.5e-108 396.7 273 75.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.5e-108 396.7 270 74.4
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 2.5e-108 396.0 279 71.7
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.5e-108 396.0 276 73.6
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.2e-108 395.2 278 72.7
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 5.5e-108 394.8 281 73.3
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 5.5e-108 394.8 277 73.6
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 9.4e-108 394.0 240 84.6
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.2e-107 393.7 270 73.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-107 393.7 275 73.8
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.2e-107 393.7 277 73.6
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.7e-107 392.5 268 73.1
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 3.6e-107 392.1 269 73.6
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 3.6e-107 392.1 275 73.8
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.7e-107 391.7 282 72.0
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.4e-106 390.2 279 71.0
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.8e-106 389.8 266 71.8
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 4.0e-106 388.7 278 70.1
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.0e-106 388.7 275 72.4
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.8e-106 387.5 275 73.1
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 8.8e-106 387.5 279 72.0
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 4.4e-105 385.2 276 71.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.3e-104 383.6 280 69.3
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.2e-104 382.9 264 71.6
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 4.9e-104 381.7 268 73.1
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 6.3e-104 381.3 264 71.6
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.1e-103 380.6 273 71.4
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.1e-103 380.6 271 73.4
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 1.4e-103 380.2 277 70.4
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.8e-103 379.8 267 71.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.1e-103 379.0 264 70.8
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 9.1e-103 377.5 273 70.7
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.0e-102 376.3 267 70.4
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.7e-102 375.9 273 70.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.7e-102 375.9 241 81.3
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.5e-102 375.6 289 69.6
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 3.5e-102 375.6 271 69.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 4.5e-102 375.2 267 70.0
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-101 372.9 267 70.0
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-101 372.9 267 70.0
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 3.8e-101 372.1 276 66.7
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 3.8e-101 372.1 271 67.5
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.8e-101 372.1 273 69.6
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 5.0e-101 371.7 280 68.6
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 6.6e-101 371.3 278 69.4
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.9e-100 369.8 278 68.7
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 5.6e-100 368.2 263 69.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 9.5e-100 367.5 281 68.7
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.1e-99 366.3 281 67.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 4.7e-99 365.2 279 68.8
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 6.1e-99 364.8 280 70.7
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 2.0e-97 359.8 272 68.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.4e-97 358.6 286 65.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 4.4e-97 358.6 281 67.3
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 7.5e-97 357.8 286 65.7
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 7.5e-97 357.8 268 69.4
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.7e-96 356.7 285 66.3
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 2.2e-96 356.3 270 68.1
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 8.3e-96 354.4 276 65.6
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.8e-95 353.2 275 67.3
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 7.0e-95 351.3 276 65.9
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 9.2e-95 350.9 273 67.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.5e-94 349.0 284 64.4
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.3e-93 346.3 225 79.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.9e-92 343.2 264 66.7
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.3e-92 342.0 284 64.4
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.6e-91 340.1 277 64.6
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 3.6e-91 339.0 280 63.6
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 3.1e-90 335.9 290 63.1
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.0e-89 333.2 234 71.8
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 5.8e-89 331.6 264 66.3
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 9.8e-89 330.9 264 65.2
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.4e-87 326.2 274 62.0
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.2e-87 325.9 237 71.3
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.5e-86 322.4 221 74.7
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 3.5e-86 322.4 268 61.6
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.3e-85 320.5 240 69.2
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 5.0e-85 318.5 271 58.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 5.2e-82 308.5 259 59.5
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 5.2e-82 308.5 274 56.6
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.9e-80 302.8 232 66.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 9.2e-79 297.7 390 45.4
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.0e-78 295.0 267 59.2
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.1e-68 264.2 243 60.1
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.6e-67 259.2 268 53.7
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.3e-64 250.8 260 53.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 2.5e-60 236.5 149 83.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-59 233.8 153 73.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 7.9e-54 214.9 196 61.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.6e-51 207.2 183 65.0
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.8e-50 203.8 220 52.3
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 9.9e-49 198.0 161 64.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.0e-45 188.0 215 49.3
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.3e-42 175.6 140 58.6
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.9e-40 169.1 120 73.3
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-39 166.8 135 66.7
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-33 147.9 115 70.4
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 5.5e-31 139.0 136 58.8
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.3e-29 134.4 217 44.2
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 7.4e-28 128.6 133 59.4
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.2e-23 113.2 77 72.7
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.6e-20 103.6 246 31.7
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.4e-20 102.1 80 66.2
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 9.7e-12 75.1 108 41.7
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.8e-11 72.8 46 67.4


User provided reference genes

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