Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.5e-236 820.8 413 100.0
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.4e-213 744.2 426 89.7
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.5e-212 741.5 426 89.0
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.6e-207 723.8 405 90.1
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-205 718.8 405 89.9
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-203 713.4 405 90.6
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-203 712.6 426 86.6
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-202 708.8 426 86.9
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-194 681.4 405 86.4
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-84 316.6 181 81.8
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.4e-45 186.4 410 32.0
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.7e-45 185.3 418 31.1
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-44 184.5 418 31.1
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-44 184.5 410 31.7
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-44 184.5 418 30.9
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-44 183.7 418 30.9
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-44 183.3 426 31.2
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.8e-44 183.0 418 30.9
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.8e-44 183.0 418 30.9
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.2e-44 182.2 404 32.2
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.1e-43 180.3 403 31.5
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-42 178.3 410 30.7
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-42 177.9 316 34.2
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-42 177.9 316 34.2
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-42 177.9 418 30.6
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-42 177.9 316 34.2
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-42 177.9 316 34.2
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.6e-42 177.2 316 34.2
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.6e-42 177.2 316 34.2
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.5e-42 176.4 418 30.4
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.9e-42 176.0 316 34.2
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 5.3e-35 152.9 344 30.2
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 6.7e-30 136.0 354 27.7
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.6e-26 124.8 404 28.5
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 2.7e-26 124.0 184 35.3
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 3.5e-26 123.6 252 31.3
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-25 122.1 285 30.2
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.8e-25 120.2 414 26.6
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-24 118.6 285 30.2
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 9.4e-24 115.5 194 34.0
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 8.0e-23 112.5 256 30.5
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-22 112.1 379 24.5
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.4e-22 111.7 410 25.1
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.4e-22 111.7 410 25.1
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.2e-22 109.8 256 29.7
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.8e-22 109.4 330 28.2
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.8e-22 109.4 254 29.9
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-22 109.0 329 28.3
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.6e-21 107.5 256 29.7
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.4e-21 106.7 246 30.1
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-20 103.6 226 31.0
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.7e-20 103.6 305 26.9
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 3.7e-20 103.6 374 27.0
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 4.8e-20 103.2 193 32.6
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-19 102.1 373 24.7
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.8e-19 101.3 403 25.8
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.1e-19 100.5 259 29.0
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.0e-19 99.4 388 23.2
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.1e-19 99.0 266 26.7
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.5e-18 96.7 327 27.8
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.5e-18 96.7 404 25.5
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 7.7e-18 95.9 407 24.8
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.0e-17 93.2 203 31.0
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.5e-17 92.4 157 35.0
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.9e-16 91.3 266 26.7
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 3.2e-16 90.5 263 25.5
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.2e-16 89.4 205 30.7
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-16 89.0 227 27.3
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-16 89.0 227 27.3
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-16 89.0 227 27.3
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 9.5e-16 89.0 237 29.1
vmacro17715 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.2e-15 88.6 191 30.9
vmacro23365 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.2e-15 88.6 191 30.9
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-15 88.2 205 30.2
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.1e-15 87.8 157 32.5
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.8e-15 87.4 399 23.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-15 86.7 344 26.2
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.1e-15 86.3 236 25.4
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-14 84.7 345 27.2
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.8e-14 84.7 146 39.0
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 3.0e-14 84.0 232 28.4
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 8.8e-14 82.4 411 23.4
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-13 82.0 360 21.7
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.5e-13 79.3 309 23.6
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.8e-13 79.0 167 28.7
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.8e-13 79.0 167 28.7
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 9.8e-13 79.0 398 22.9
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 1.3e-12 78.6 128 33.6
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-12 78.2 159 32.1
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.9e-12 76.6 194 31.4
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 6.3e-12 76.3 337 23.4
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.3e-12 76.3 317 24.9
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 1.1e-11 75.5 374 23.8
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.1e-11 73.6 378 21.7
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 5.4e-11 73.2 285 24.6
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.4e-11 73.2 252 26.2
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.4e-11 73.2 309 24.3
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 5.4e-11 73.2 305 23.6
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.0e-11 72.8 265 24.5
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 9.2e-11 72.4 302 23.5
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-10 72.0 100 34.0
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 3.5e-10 70.5 458 23.4
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-10 70.1 201 26.9
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-10 70.1 198 25.3
TWI38G2357 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 2.3e-09 67.8 59 54.2
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.8e-09 67.0 374 21.4
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 3.8e-09 67.0 369 22.8
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 5.0e-09 66.6 385 21.6
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.6e-09 66.2 170 25.9
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 8.6e-09 65.9 369 22.8
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 8.6e-09 65.9 58 44.8
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.5e-08 65.1 251 22.7
CSS0028748 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110352 1.5e-08 65.1 240 25.8
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.5e-08 64.3 135 31.1
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.6e-08 63.2 159 27.7
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 7.3e-08 62.8 65 38.5
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 7.3e-08 62.8 71 38.0
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 7.3e-08 62.8 148 28.4
CSS0040832 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109556 9.5e-08 62.4 276 22.1
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 197 25.9
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.2e-07 62.0 351 21.7
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 1.6e-07 61.6 236 25.8
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 2.1e-07 61.2 71 38.0
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.1e-07 59.7 146 28.1
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-06 58.9 115 31.3
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-06 58.9 115 31.3
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-06 58.9 115 31.3
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-06 58.9 127 29.9
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 58.5 115 31.3
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 58.5 115 31.3
FvH4_3g24490 Fragaria vesca HOM05D003258 ORTHO05D010059 1.4e-06 58.5 197 24.4
FvH4_3g33780 Fragaria vesca HOM05D003258 ORTHO05D010059 1.4e-06 58.5 197 24.4
CSS0032655 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112617 1.8e-06 58.2 172 27.3
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-06 58.2 324 21.6
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-06 58.2 324 21.6
FvH4_4g09870 Fragaria vesca HOM05D003258 ORTHO05D010059 2.3e-06 57.8 197 24.4
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 2.3e-06 57.8 53 41.5
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-06 57.8 206 24.8
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.0e-06 57.0 82 36.6
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 4.0e-06 57.0 209 26.8
FvH4_6g36690 Fragaria vesca HOM05D003258 ORTHO05D010059 4.0e-06 57.0 197 23.9
FAN04G3025 Fragaria x ananassa HOM05D003258 ORTHO05D010059 4.0e-06 57.0 164 26.8
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-06 57.0 244 25.4
CSS0045406 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D111373 5.2e-06 56.6 222 24.3
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 244 25.4
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 244 25.4
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 244 25.4
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.8e-06 56.2 414 19.3
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 8.9e-06 55.8 117 30.8


User provided reference genes

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