Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048095 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 9.1e-103 377.5 282 100.0
Dinv23049 Davidia involucrata HOM05D004527 ORTHO05D005335 8.9e-58 228.0 235 91.5
Dinv26963 Davidia involucrata HOM05D004527 ORTHO05D005335 2.6e-57 226.5 235 89.4
Actinidia11961 Actinidia chinensis HOM05D004527 ORTHO05D005335 8.3e-56 221.5 235 89.8
Hma1.2p1_1139F.1_g260820 Hydrangea macrophylla HOM05D004527 ORTHO05D005335 1.4e-55 220.7 229 89.1
Actinidia36420 Actinidia chinensis HOM05D004527 ORTHO05D005335 1.9e-55 220.3 235 88.9
CSS0027520 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 1.5e-52 210.7 231 87.0
CSS0031628 Camellia sinensis var. sinensis HOM05D004527 ORTHO05D005335 1.5e-52 210.7 231 87.0
TAR628G0079 Trochodendron aralioides HOM05D004527 ORTHO05D005335 6.2e-51 205.3 230 87.8
COL.COLO4_11620 Corchorus olitorius HOM05D004527 ORTHO05D005335 1.8e-50 203.8 229 86.5
RcHm_v2.0_Chr2g0108871 Rosa chinensis HOM05D004527 ORTHO05D005335 2.3e-50 203.4 228 86.4
Thecc.01G076900 Theobroma cacao HOM05D004527 ORTHO05D005335 5.2e-50 202.2 229 86.5
Ciclev10026270m.g Citrus clementina HOM05D004527 ORTHO05D005335 8.9e-50 201.4 260 77.7
Duzib264G0041 Durio zibethinus HOM05D004527 ORTHO05D005335 1.5e-49 200.7 229 86.9
TAR381G1318 Trochodendron aralioides HOM05D004527 ORTHO05D005335 1.5e-49 200.7 230 86.1
Duzib187G1832 Durio zibethinus HOM05D004527 ORTHO05D005335 2.6e-49 199.9 229 86.5
MD15G1301200 Malus domestica HOM05D004527 ORTHO05D005335 2.6e-49 199.9 229 86.0
Cc07_g07400 Coffea canephora HOM05D004527 ORTHO05D005335 3.4e-49 199.5 231 85.3
QL06p038806 Quercus lobata HOM05D004527 ORTHO05D005335 3.4e-49 199.5 230 86.5
CiPaw.01G001600 Carya illinoinensis HOM05D004527 ORTHO05D005335 4.4e-49 199.1 231 87.0
Gohir.D12G077300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 5.8e-49 198.7 229 86.5
Gorai.008G086100 Gossypium raimondii HOM05D004527 ORTHO05D005335 5.8e-49 198.7 229 86.5
Gohir.A02G149500 Gossypium hirsutum HOM05D004527 ORTHO05D005335 7.6e-49 198.4 229 87.3
FvH4_1g18280 Fragaria vesca HOM05D004527 ORTHO05D005335 9.9e-49 198.0 226 86.3
FAN19G0418 Fragaria x ananassa HOM05D004527 ORTHO05D005335 9.9e-49 198.0 226 86.3
CANSAT25G2808 Cannabis sativa HOM05D004527 ORTHO05D005335 1.3e-48 197.6 229 83.8
Cpa.g.sc129.69 Carica papaya HOM05D004527 ORTHO05D005335 1.3e-48 197.6 235 83.8
Prupe.6G216300 Prunus persica HOM05D004527 ORTHO05D005335 1.7e-48 197.2 220 87.3
FAN23G2001 Fragaria x ananassa HOM05D004527 ORTHO05D005335 2.2e-48 196.8 226 85.8
FAN28G1986 Fragaria x ananassa HOM05D004527 ORTHO05D005335 2.2e-48 196.8 226 85.8
DCAR_025824 Daucus carota HOM05D004527 ORTHO05D005335 2.9e-48 196.4 235 83.4
FAN26G2218 Fragaria x ananassa HOM05D004527 ORTHO05D005335 2.9e-48 196.4 226 85.4
TAR625G0245 Trochodendron aralioides HOM05D004527 ORTHO05D005335 2.9e-48 196.4 235 85.1
Duzib147G0417 Durio zibethinus HOM05D004527 ORTHO05D005335 3.7e-48 196.1 229 74.7
Gohir.D03G030300 Gossypium hirsutum HOM05D004527 ORTHO05D005335 3.7e-48 196.1 228 86.8
Gorai.003G032400 Gossypium raimondii HOM05D004527 ORTHO05D005335 3.7e-48 196.1 228 86.8
Nitab4.5_0000142g0410 Nicotiana tabacum HOM05D004527 ORTHO05D005335 6.4e-48 195.3 235 84.3
Potri.014G012300 Populus trichocarpa HOM05D004527 ORTHO05D005335 6.4e-48 195.3 230 86.5
Manes.12G117900 Manihot esculenta HOM05D004527 ORTHO05D005335 8.4e-48 194.9 235 83.0
Nn5g30677 Nelumbo nucifera HOM05D004527 ORTHO05D005335 1.1e-47 194.5 235 84.3
Oeu034346.1 Olea europaea HOM05D004527 ORTHO05D005335 1.1e-47 194.5 236 83.1
MD02G1190100 Malus domestica HOM05D004527 ORTHO05D005335 1.4e-47 194.1 229 84.3
TWI74G0505 Tripterygium wilfordii HOM05D004527 ORTHO05D005335 1.4e-47 194.1 235 84.7
Nitab4.5_0000776g0070 Nicotiana tabacum HOM05D004527 ORTHO05D005335 1.9e-47 193.7 235 83.8
Gohir.D11G211000 Gossypium hirsutum HOM05D004527 ORTHO05D005335 3.2e-47 193.0 230 83.9
Sabra14G0006900 Salix brachista HOM05D004527 ORTHO05D005335 3.2e-47 193.0 230 85.2
Gohir.A12G080600 Gossypium hirsutum HOM05D004527 ORTHO05D005335 4.1e-47 192.6 229 85.6
Sabra07G0005800 Salix brachista HOM05D004527 ORTHO05D005335 5.4e-47 192.2 230 84.3
Gorai.007G226700 Gossypium raimondii HOM05D004527 ORTHO05D005335 9.2e-47 191.4 230 83.5
Migut.L00429 Erythranthe guttata HOM05D004527 ORTHO05D005335 2.1e-46 190.3 229 85.2
PSO017G0995 Papaver somniferum HOM05D004527 ORTHO05D005335 4.6e-46 189.1 233 77.7
Potri.007G007500 Populus trichocarpa HOM05D004527 ORTHO05D005335 4.6e-46 189.1 229 84.3
PGSC0003DMG400043061 Solanum tuberosum HOM05D004527 ORTHO05D005335 4.6e-46 189.1 235 83.0
SGA_v2.0_scaffold269G46278 Striga asiatica HOM05D004527 ORTHO05D005335 6.0e-46 188.7 216 87.5
GSVIVG01007390001 Vitis vinifera HOM05D004527 ORTHO05D005335 1.0e-45 188.0 215 86.5
CAN.G1343.10 Capsicum annuum HOM05D004527 ORTHO05D005335 1.3e-45 187.6 228 83.8
vmacro23340 Vaccinium macrocarpon HOM05D004527 ORTHO05D005335 1.7e-45 187.2 244 53.7
Oeu013345.1 Olea europaea HOM05D004527 ORTHO05D005335 3.0e-45 186.4 266 73.7
PSO170G0158 Papaver somniferum HOM05D004527 ORTHO05D005335 3.0e-45 186.4 235 78.3
Aqoxy6G02924 Aquilegia oxysepala HOM05D004527 ORTHO05D005335 6.6e-45 185.3 211 89.1
SalBow3G2616 Salvia bowleyana HOM05D004527 ORTHO05D005335 6.6e-45 185.3 211 89.1
Solyc02g092040.1 Solanum lycopersicum HOM05D004527 ORTHO05D005335 6.6e-45 185.3 211 88.6
Sopen02g036620 Solanum pennellii HOM05D004527 ORTHO05D005335 6.6e-45 185.3 211 88.6
Lj4P166T18 Lonicera japonica HOM05D004527 ORTHO05D005335 7.3e-44 181.8 230 83.9
PGR004G2554 Punica granatum HOM05D004527 ORTHO05D005335 7.3e-44 181.8 228 83.8
ClCG01G017820 Citrullus lanatus HOM05D004527 ORTHO05D005335 9.6e-44 181.4 234 80.8
MELO3C007658.2 Cucumis melo HOM05D004527 ORTHO05D005335 3.6e-43 179.5 234 79.9
CsaV3_6G044360 Cucumis sativus L. HOM05D004527 ORTHO05D005335 3.6e-43 179.5 234 79.9
CARHR279830 Cardamine hirsuta HOM05D004527 ORTHO05D005335 4.7e-43 179.1 231 79.7
Lj7C113T0 Lonicera japonica HOM05D004527 ORTHO05D005335 4.7e-43 179.1 228 82.5
THA.LOC104827740 Tarenaya hassleriana HOM05D004527 ORTHO05D005335 6.2e-43 178.7 229 80.8
MSTRG.15342 Avicennia marina HOM05D004527 ORTHO05D005335 8.1e-43 178.3 216 85.2
Rhsim10G0094600 Rhododendron simsii HOM05D004527 ORTHO05D005335 2.4e-42 176.8 213 87.8
Sed0004587 Sechium edule HOM05D004527 ORTHO05D005335 3.1e-42 176.4 231 80.1
CARHR158830 Cardamine hirsuta HOM05D004527 ORTHO05D005335 1.2e-41 174.5 230 81.3
Migut.H00322 Erythranthe guttata HOM05D004527 ORTHO05D005335 1.2e-41 174.5 217 85.7
Glyma.01G196000 Glycine max HOM05D004527 ORTHO05D005335 1.5e-41 174.1 235 76.2
Carub.0005s1611 Capsella rubella HOM05D004527 ORTHO05D005335 2.0e-41 173.7 231 81.0
HanXRQChr14g0447741 Helianthus annuus HOM05D004527 ORTHO05D005335 2.0e-41 173.7 240 77.1
Peaxi162Scf00096g00187 Petunia axillaris HOM05D004527 ORTHO05D005335 2.0e-41 173.7 237 77.6
MSTRG.2802 Avicennia marina HOM05D004527 ORTHO05D005335 3.4e-41 172.9 229 77.3
AT5G65830 Arabidopsis thaliana HOM05D004527 ORTHO05D005335 4.4e-41 172.6 231 79.2
Lsat_1_v5_gn_3_85800 Lactuca sativa HOM05D004527 ORTHO05D005335 4.4e-41 172.6 237 81.4
Sp5g12330 Schrenkiella parvula HOM05D004527 ORTHO05D005335 4.4e-41 172.6 230 80.4
Ca_24669_v3 Cicer arietinum L. HOM05D004527 ORTHO05D005335 5.8e-41 172.2 233 78.5
MSTRG.23652 Avicennia marina HOM05D004527 ORTHO05D005335 9.9e-41 171.4 224 80.8
Sp2g28920 Schrenkiella parvula HOM05D004527 ORTHO05D005335 9.9e-41 171.4 229 79.9
AT3G49750 Arabidopsis thaliana HOM05D004527 ORTHO05D005335 1.3e-40 171.0 231 80.5
Carub.0008s2672 Capsella rubella HOM05D004527 ORTHO05D005335 1.3e-40 171.0 231 78.8
Aa31LG1G16250 Aethionema arabicum HOM05D004527 ORTHO05D005335 2.9e-40 169.9 229 79.5
Aa31LG4G18240 Aethionema arabicum HOM05D004527 ORTHO05D005335 2.9e-40 169.9 231 80.1
Lsat_1_v5_gn_4_158441 Lactuca sativa HOM05D004527 ORTHO05D005335 2.9e-40 169.9 228 80.3
TPR.G9333 Trifolium pratense HOM05D004527 ORTHO05D005335 2.9e-40 169.9 238 78.2
AL5G29710 Arabidopsis lyrata HOM05D004527 ORTHO05D005335 3.8e-40 169.5 231 80.1
BcaC04g23245 Brassica carinata HOM05D004527 ORTHO05D005335 6.4e-40 168.7 229 80.3
C09p10730 Brassica napus HOM05D004527 ORTHO05D005335 6.4e-40 168.7 229 80.3
BolC9t53969H Brassica oleracea HOM05D004527 ORTHO05D005335 6.4e-40 168.7 229 80.3
Thhalv10005320m.g Eutrema salsugineum HOM05D004527 ORTHO05D005335 6.4e-40 168.7 231 80.1
Thhalv10010947m.g Eutrema salsugineum HOM05D004527 ORTHO05D005335 6.4e-40 168.7 230 79.6
Manes.13G108600 Manihot esculenta HOM05D004527 ORTHO05D005335 1.1e-39 167.9 215 83.7
C01p30660 Brassica napus HOM05D004527 ORTHO05D005335 1.4e-39 167.5 235 78.7
A09p09200 Brassica napus HOM05D004527 ORTHO05D005335 1.9e-39 167.2 228 79.8
BraA09t36572Z Brassica rapa HOM05D004527 ORTHO05D005335 1.9e-39 167.2 228 79.8
Phvul.002G009000 Phaseolus vulgaris HOM05D004527 ORTHO05D005335 1.9e-39 167.2 229 80.8
MSTRG.3484 Avicennia marina HOM05D004527 ORTHO05D005335 2.4e-39 166.8 216 82.9
BcaC09g49968 Brassica carinata HOM05D004527 ORTHO05D005335 4.2e-39 166.0 235 78.3
A01p24580 Brassica napus HOM05D004527 ORTHO05D005335 4.2e-39 166.0 235 78.3
BolC1t03001H Brassica oleracea HOM05D004527 ORTHO05D005335 4.2e-39 166.0 235 78.3
BraA01t02368Z Brassica rapa HOM05D004527 ORTHO05D005335 4.2e-39 166.0 235 78.3
AUR62007543 Chenopodium quinoa HOM05D004527 ORTHO05D005335 1.6e-38 164.1 216 81.5
VMungo1215G0719 Vigna mungo HOM05D004527 ORTHO05D005335 2.7e-38 163.3 229 72.9
BolC8t50091H Brassica oleracea HOM05D004527 ORTHO05D005335 3.5e-38 162.9 232 78.0
BcaC07g39438 Brassica carinata HOM05D004527 ORTHO05D005335 4.6e-38 162.5 232 78.0
C08p24770 Brassica napus HOM05D004527 ORTHO05D005335 4.6e-38 162.5 232 78.0
Psat0s1639g0080 Pisum sativum HOM05D004527 ORTHO05D005335 6.0e-38 162.2 238 76.9
BcaB01g00676 Brassica carinata HOM05D004527 ORTHO05D005335 7.8e-38 161.8 231 78.8
Lalb_Chr16g0379001 Lupinus albus HOM05D004527 ORTHO05D005335 1.0e-37 161.4 235 76.2
HPP92_020623 Vanilla planifolia HOM05D004527 ORTHO05D005335 1.0e-37 161.4 214 81.8
BcaB05g23149 Brassica carinata HOM05D004527 ORTHO05D005335 2.3e-37 160.2 230 78.7
Glyma.11G045700 Glycine max HOM05D004527 ORTHO05D005335 2.3e-37 160.2 235 76.6
EL10Ac6g15591 Beta vulgaris HOM05D004527 ORTHO05D005335 3.0e-37 159.8 214 81.8
BcaB04g20032 Brassica carinata HOM05D004527 ORTHO05D005335 6.6e-37 158.7 229 77.7
arahy.Tifrunner.gnm1.ann1.1FYE2A Arachis hypogaea HOM05D004527 ORTHO05D005335 8.7e-37 158.3 224 75.4
arahy.Tifrunner.gnm1.ann1.SGKS0T Arachis hypogaea HOM05D004527 ORTHO05D005335 8.7e-37 158.3 224 75.4
Lj2g0022505 Lotus japonicus HOM05D004527 ORTHO05D005335 1.1e-36 157.9 236 77.1
vmacro04599 Vaccinium macrocarpon HOM05D004527 ORTHO05D005335 1.9e-36 157.1 101 76.2
Eucgr.I00670 Eucalyptus grandis HOM05D004527 ORTHO05D005335 2.5e-36 156.8 230 77.8
Medtr5g015050 Medicago truncatula HOM05D004527 ORTHO05D005335 2.5e-36 156.8 232 76.7
Atru.chr3.1065 Acer truncatum HOM05D004527 ORTHO05D005335 1.6e-35 154.1 208 82.7
HanXRQChr11g0323561 Helianthus annuus HOM05D004527 ORTHO05D005335 3.6e-35 152.9 235 77.0
Lsat_1_v5_gn_2_80060 Lactuca sativa HOM05D004527 ORTHO05D005335 4.8e-35 152.5 197 87.3
TWI77G0125 Tripterygium wilfordii HOM05D004527 ORTHO05D005335 1.1e-34 151.4 190 90.0
MBI16_g04107_MAGBIO Magnolia biondii HOM05D004527 ORTHO05D005335 3.1e-34 149.8 234 76.1
HanXRQChr04g0112451 Helianthus annuus HOM05D004527 ORTHO05D005335 4.0e-34 149.4 235 72.3
BcaC04g23244 Brassica carinata HOM05D004527 ORTHO05D005335 1.5e-33 147.5 250 56.4
Gohir.A11G211900 Gossypium hirsutum HOM05D004527 ORTHO05D005335 3.4e-33 146.4 240 38.3
Nn6g34534 Nelumbo nucifera HOM05D004527 ORTHO05D005335 4.4e-33 146.0 93 76.3
SHI12014 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-33 146.0 236 75.0
Sc03g0002710 Simmondsia chinensis HOM05D004527 ORTHO05D005335 4.4e-33 146.0 236 74.6
SEGI_31883 Sequoiadendron giganteum HOM05D004527 ORTHO05D005335 1.9e-31 140.6 235 64.7
CDE01G0566 Ceratophyllum demersum HOM05D004527 ORTHO05D005335 2.7e-30 136.7 224 74.1
Os09g0131200 Oryza sativa ssp. japonica HOM05D004527 ORTHO05D005335 2.7e-30 136.7 223 74.9
ATR0739G175 Amborella trichopoda HOM05D004527 ORTHO05D005335 1.3e-29 134.4 211 72.0
Sc03g0002680 Simmondsia chinensis HOM05D004527 ORTHO05D005335 5.1e-29 132.5 222 75.7
Zm00001eb257530 Zea mays HOM05D004527 ORTHO05D005335 2.5e-28 130.2 217 72.8
Zm00001eb192660 Zea mays HOM05D004527 ORTHO05D005335 9.6e-28 128.3 217 71.9
MBI16_g37622_MAGBIO Magnolia biondii HOM05D004527 ORTHO05D005335 2.7e-22 110.2 87 62.1
AUR62004034 Chenopodium quinoa HOM05D004527 ORTHO05D005335 2.5e-15 87.0 46 87.0
Haze_15019 Corylus avellana HOM05D004527 ORTHO05D005335 2.5e-15 87.0 45 88.9
SalBow1G8006 Salvia bowleyana HOM05D004527 ORTHO05D005335 2.5e-12 77.0 45 77.8
Pp3c11_20500 Physcomitrium patens HOM05D004527 ORTHO05D005335 2.1e-11 73.9 235 64.3
SMO351G0231 Selaginella moellendorffii HOM05D004527 ORTHO05D005335 2.1e-11 73.9 230 53.0
Pp3c7_5330 Physcomitrium patens HOM05D004527 ORTHO05D005335 6.3e-11 72.4 244 62.3
CDE12G0864 Ceratophyllum demersum HOM05D004527 ORTHO05D005335 8.2e-11 72.0 45 77.8
vmacro04600 Vaccinium macrocarpon HOM05D004527 ORTHO05D005335 9.0e-10 68.6 52 69.2
SEGI_31292 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 4.2e-07 59.7 96 39.6
Mapoly0037s0017 Marchantia polymorpha HOM05D004527 ORTHO05D005335 3.5e-06 56.6 216 56.5
ATR0730G160 Amborella trichopoda HOM05D004527 ORTHO05D005335 6.1e-06 55.8 49 51.0
AUR62008062 Chenopodium quinoa HOM05D000094 ORTHO05D001056 7.9e-06 55.5 106 35.8


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