Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 9.6e-124 446.8 221 100.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 4.8e-83 311.6 230 70.4
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 4.3e-76 288.5 231 67.1
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.2e-75 286.2 231 67.5
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.1e-74 282.3 227 67.0
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 7.7e-73 277.7 225 69.3
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.8e-69 266.5 211 69.2
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 3.9e-69 265.4 233 63.5
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 5.2e-69 265.0 228 62.7
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 2.0e-68 263.1 229 61.6
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 4.4e-68 261.9 228 61.8
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 9.7e-68 260.8 233 63.9
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.8e-67 259.2 230 62.6
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.1e-66 257.3 233 60.5
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 4.1e-66 255.4 230 61.3
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 5.3e-66 255.0 229 60.3
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.6e-65 253.4 233 60.5
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.6e-65 253.4 232 60.8
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 4.5e-65 251.9 230 60.4
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 7.7e-65 251.1 226 61.1
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 7.7e-65 251.1 228 59.6
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.5e-63 246.9 231 58.4
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 4.2e-63 245.4 231 57.6
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 7.2e-63 244.6 233 58.8
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.2e-62 243.8 231 58.9
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 3.6e-62 242.3 219 59.8
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 3.3e-60 235.7 228 57.9
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 5.7e-60 235.0 229 56.8
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 9.7e-60 234.2 230 58.3
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.3e-59 233.8 230 57.4
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 3.7e-59 232.3 231 57.6
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.7e-59 232.3 216 59.7
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 8.2e-59 231.1 228 55.7
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.1e-58 230.7 227 57.7
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.4e-58 230.3 232 55.2
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 4.1e-58 228.8 229 56.8
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 7.0e-58 228.0 232 57.8
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 3.5e-57 225.7 210 58.6
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 4.5e-57 225.3 232 54.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 5.9e-57 224.9 229 55.5
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 1.3e-56 223.8 241 55.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.9e-56 222.6 237 55.7
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 1.1e-55 220.7 233 52.4
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.1e-55 220.7 232 57.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.9e-55 219.9 234 54.3
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 1.9e-55 219.9 225 54.2
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 5.5e-55 218.4 234 53.8
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 1.2e-54 217.2 227 52.9
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 3.6e-54 215.7 228 53.9
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 6.1e-54 214.9 231 55.4
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.8e-53 213.4 234 53.4
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.8e-53 213.4 230 54.8
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.8e-53 213.4 213 55.9
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.3e-53 213.0 234 53.0
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 8.8e-53 211.1 231 53.7
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 3.4e-52 209.1 230 52.6
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.8e-51 206.1 227 53.3
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 3.7e-51 205.7 236 53.4
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 1.1e-50 204.1 207 53.6
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 1.2e-49 200.7 233 49.4
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 2.7e-49 199.5 232 49.6
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 5.9e-49 198.4 205 56.1
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 1.8e-45 186.8 232 47.0
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 1.7e-43 180.3 141 65.2
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 6.3e-43 178.3 149 65.8
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 5.2e-37 158.7 105 78.1
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 3.7e-35 152.5 161 53.4
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 3.7e-35 152.5 122 66.4
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 1.8e-34 150.2 184 51.6
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 2.7e-33 146.4 235 41.7
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 1.0e-32 144.4 162 49.4
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 2.4e-26 123.2 182 45.1
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.0e-21 105.9 298 29.2
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 6.8e-13 78.6 85 44.7
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 5.8e-12 75.5 110 38.2


User provided reference genes

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