Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.0e-182 643.3 326 100.0
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.8e-158 562.8 335 87.2
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 1.3e-63 247.7 311 46.0
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 1.7e-60 237.3 309 45.3
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 4.9e-60 235.7 274 46.0
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 2.4e-59 233.4 288 45.8
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 2.4e-59 233.4 269 49.1
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 4.2e-59 232.6 289 45.3
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 4.2e-59 232.6 292 45.2
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 5.5e-59 232.3 292 45.2
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 9.3e-59 231.5 276 45.7
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 4.6e-58 229.2 272 45.6
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 6.0e-58 228.8 276 47.5
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 6.0e-58 228.8 289 45.7
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 1.3e-57 227.6 272 44.9
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.8e-57 227.3 272 45.6
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 1.8e-57 227.3 272 44.9
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 1.8e-57 227.3 270 47.4
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 1.8e-57 227.3 273 47.3
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 2.3e-57 226.9 273 46.2
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 2.3e-57 226.9 278 45.3
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 3.0e-57 226.5 277 45.5
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 6.7e-57 225.3 272 48.2
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 8.7e-57 224.9 268 46.3
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 1.5e-56 224.2 280 43.9
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 1.9e-56 223.8 273 44.7
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 2.5e-56 223.4 276 44.6
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 2.5e-56 223.4 270 45.9
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 1.3e-55 221.1 235 48.1
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 2.8e-55 219.9 269 46.1
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 3.7e-55 219.5 269 46.5
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 4.8e-55 219.2 267 44.2
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 6.2e-55 218.8 277 45.5
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 6.2e-55 218.8 275 45.8
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 6.2e-55 218.8 289 42.9
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 6.2e-55 218.8 289 42.9
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 6.2e-55 218.8 265 44.9
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 8.2e-55 218.4 276 44.2
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.1e-54 218.0 263 46.8
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 1.1e-54 218.0 288 43.1
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 1.1e-54 218.0 269 45.7
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 1.1e-54 218.0 275 44.7
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 1.4e-54 217.6 269 46.5
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 3.1e-54 216.5 275 44.7
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 6.9e-54 215.3 271 44.6
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 6.9e-54 215.3 277 41.9
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 9.0e-54 214.9 266 45.1
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 1.5e-53 214.2 273 45.1
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 1.5e-53 214.2 280 45.0
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 3.4e-53 213.0 280 44.3
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 4.5e-53 212.6 272 44.1
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 4.5e-53 212.6 299 41.8
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 5.8e-53 212.2 235 48.1
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 5.8e-53 212.2 273 42.9
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 1.0e-52 211.5 271 43.2
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 1.3e-52 211.1 245 48.2
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 1.7e-52 210.7 275 42.2
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 3.8e-52 209.5 295 41.7
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 3.8e-52 209.5 270 44.1
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 4.9e-52 209.1 260 44.6
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 8.4e-52 208.4 271 44.6
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 8.4e-52 208.4 274 43.4
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 1.4e-51 207.6 271 43.2
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 1.9e-51 207.2 276 42.4
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 2.5e-51 206.8 299 41.1
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 2.5e-51 206.8 270 43.3
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 4.2e-51 206.1 274 42.7
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 5.5e-51 205.7 280 43.6
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 5.5e-51 205.7 274 43.8
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 5.5e-51 205.7 277 41.9
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 9.3e-51 204.9 270 43.0
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 1.6e-50 204.1 269 43.1
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 2.7e-50 203.4 271 42.4
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 3.5e-50 203.0 274 42.0
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 4.6e-50 202.6 271 42.4
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 7.9e-50 201.8 280 43.2
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 7.9e-50 201.8 241 46.1
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 1.3e-49 201.1 270 43.0
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 1.3e-49 201.1 276 41.3
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 3.0e-49 199.9 270 42.2
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 5.1e-49 199.1 265 44.2
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 1.1e-48 198.0 195 52.3
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.5e-48 197.6 341 36.4
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 1.9e-48 197.2 347 38.3
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 5.7e-48 195.7 271 41.7
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 9.7e-48 194.9 274 41.6
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 1.3e-47 194.5 276 39.1
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 1.3e-47 194.5 273 41.4
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 1.6e-47 194.1 272 41.9
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 2.8e-47 193.4 272 39.3
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 4.8e-47 192.6 302 38.7
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 6.3e-47 192.2 273 39.6
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 6.3e-47 192.2 260 42.7
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 8.2e-47 191.8 273 41.4
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 1.4e-46 191.0 264 43.6
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.4e-46 190.3 173 54.3
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 3.1e-46 189.9 271 41.3
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 5.3e-46 189.1 277 39.4
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 9.0e-46 188.3 273 39.9
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 1.2e-45 188.0 273 39.9
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 1.2e-45 188.0 273 39.9
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 1.2e-45 188.0 200 50.0
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 1.2e-45 188.0 273 39.6
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 2.0e-45 187.2 269 41.3
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 2.0e-45 187.2 268 40.3
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 2.0e-45 187.2 273 39.9
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 2.0e-45 187.2 276 39.1
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 4.5e-45 186.0 295 39.0
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 3.8e-44 183.0 268 39.6
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 6.5e-44 182.2 272 39.0
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 1.1e-43 181.4 232 43.1
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 7.2e-43 178.7 269 38.7
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 1.2e-42 177.9 248 42.3
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.0e-41 174.9 266 41.0
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 5.1e-41 172.6 196 43.9
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 5.1e-41 172.6 261 41.8
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 9.7e-40 168.3 339 36.6
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 1.3e-39 167.9 287 37.3
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 4.8e-39 166.0 190 43.2
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 3.1e-38 163.3 138 58.0
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.2e-34 151.4 296 36.5
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 7.7e-29 132.1 104 59.6
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 3.8e-28 129.8 136 45.6
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 8.0e-26 122.1 138 43.5
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 2.0e-21 107.5 294 29.6
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 1.5e-19 101.3 171 36.3
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 2.1e-18 97.4 84 53.6
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 5.2e-17 92.8 234 31.2
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 2.0e-16 90.9 124 35.5
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 7.0e-14 82.4 242 28.1
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 4.5e-13 79.7 162 33.3
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 2.5e-11 73.9 90 44.4
PGSC0003DMG400026496 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.7e-07 61.2 70 48.6
Os07g0510300 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 8.3e-07 58.9 89 36.0
Aqoxy3G02634 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 4.1e-06 56.6 225 27.6


User provided reference genes

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