Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048060 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 4.1e-159 564.7 291 100.0
CSS0020408 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 4.0e-138 495.0 273 85.3
CSS0024259 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 4.0e-138 495.0 273 85.3
CSS0017204 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 4.7e-102 375.2 269 65.1
Rhsim06G0204000 Rhododendron simsii HOM05D011555 ORTHO05D013920 2.0e-92 343.2 264 63.6
Potri.001G373900 Populus trichocarpa HOM05D011555 ORTHO05D013920 1.9e-79 300.1 270 54.8
Atru.chr2.2347 Acer truncatum HOM05D011555 ORTHO05D013920 1.6e-78 297.0 266 51.9
Lj1P836T37 Lonicera japonica HOM05D011555 ORTHO05D013920 4.2e-71 272.3 271 50.9
QL08p023123 Quercus lobata HOM05D011555 ORTHO05D013920 1.1e-66 257.7 267 49.1
Sabra16G0246300 Salix brachista HOM05D011555 ORTHO05D013920 9.5e-63 244.6 247 50.2
DCAR_013132 Daucus carota HOM05D011555 ORTHO05D013920 1.2e-49 201.1 178 52.8
Actinidia12547 Actinidia chinensis HOM05D011555 ORTHO05D013920 5.8e-44 182.2 148 58.1
DCAR_017115 Daucus carota HOM05D011555 ORTHO05D013920 1.3e-40 171.0 170 46.5
DCAR_013133 Daucus carota HOM05D011555 ORTHO05D013920 9.6e-39 164.9 161 44.7
DCAR_018010 Daucus carota HOM05D011555 ORTHO05D013920 4.4e-28 129.4 115 47.0
TAR624G0446 Trochodendron aralioides HOM05D010647 ORTHO05D012576 8.1e-22 108.6 265 29.1
THA.LOC104806991 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 2.2e-11 73.9 272 27.2
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.9e-10 70.9 274 26.6
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 2.5e-10 70.5 279 26.9
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 4.2e-10 69.7 274 26.6
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 9.3e-10 68.6 274 26.3
THA.LOC104824394 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 6.7e-08 62.4 278 25.2
FvH4_7g29321 Fragaria vesca HOM05D002077 ORTHO05D000818 1.6e-06 57.8 179 24.0


User provided reference genes

Program Settings