Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 4.3e-80 301.2 146 100.0
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 1.7e-36 156.4 148 61.5
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 7.9e-26 120.9 146 46.6
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 9.1e-22 107.5 136 49.3
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 2.0e-21 106.3 148 41.9
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 1.7e-20 103.2 148 43.9
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 2.2e-20 102.8 135 43.7
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 2.2e-20 102.8 122 45.1
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 2.9e-20 102.4 112 46.4
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.8e-17 93.2 129 42.6
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 2.3e-17 92.8 122 44.3
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 8.8e-17 90.9 135 37.8
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 4.4e-16 88.6 107 50.5
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 9.7e-16 87.4 123 42.3
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 9.7e-16 87.4 123 42.3
Aqoxy3G00486 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 3.7e-15 85.5 145 38.6
Aqoxy1G00314 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 1.1e-14 84.0 108 42.6
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 2.4e-14 82.8 123 41.5
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 4.1e-14 82.0 146 34.9
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 9.1e-14 80.9 112 42.0
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 1.3e-12 77.0 132 37.9
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 8.5e-12 74.3 134 35.1
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 1.9e-11 73.2 109 41.3
Gorai.008G197300 Gossypium raimondii HOM05D009211 ORTHO05D011170 1.9e-11 73.2 138 34.8
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 5.5e-11 71.6 134 35.8
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 5.5e-11 71.6 127 34.6
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 1.6e-10 70.1 125 35.2
CAN.G587.37 Capsicum annuum HOM05D035866 ORTHO05D011170 2.7e-10 69.3 118 39.0
Ca_21787_v3 Cicer arietinum L. HOM05D009211 ORTHO05D011170 6.1e-10 68.2 128 36.7
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 6.1e-10 68.2 117 37.6
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 1.8e-09 66.6 128 35.9
Lj4g0005212 Lotus japonicus HOM05D009211 ORTHO05D011170 1.8e-09 66.6 131 33.6
Sopen06g026830 Solanum pennellii HOM05D035866 ORTHO05D011170 5.2e-09 65.1 113 39.8
Lsat_1_v5_gn_1_13601 Lactuca sativa HOM05D009211 ORTHO05D011170 8.8e-09 64.3 121 37.2
Gohir.A12G181250 Gossypium hirsutum HOM05D009211 ORTHO05D011170 1.5e-08 63.5 65 49.2
Solyc06g069540.1 Solanum lycopersicum HOM05D035866 ORTHO05D011170 1.5e-08 63.5 110 37.3


User provided reference genes

Program Settings