Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047994 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 4.5e-46 187.6 96 100.0
CSS0042314 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 1.2e-41 172.9 96 95.8
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.5e-12 76.3 94 44.7
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 1.5e-12 76.3 94 44.7
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 5.6e-12 74.3 91 44.0
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 1.6e-11 72.8 82 51.2
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.1e-11 72.4 82 51.2
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 3.6e-11 71.6 82 50.0
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.2e-11 70.9 82 51.2
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 8.1e-11 70.5 94 45.7
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.4e-10 69.7 94 41.5
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 1.4e-10 69.7 82 47.6
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 2.4e-10 68.9 95 38.9
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 4.0e-10 68.2 92 43.5
GSVIVG01036505001 Vitis vinifera HOM05D000926 ORTHO05D000707 6.8e-10 67.4 92 44.6
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.2e-09 66.6 96 43.8
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 1.2e-09 66.6 97 46.4
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 1.2e-09 66.6 84 44.0
Sabra04G0073900 Salix brachista HOM05D000926 ORTHO05D000707 1.2e-09 66.6 82 50.0
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 4.4e-09 64.7 82 40.2
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 5.8e-09 64.3 94 38.3
Manes.05G115600 Manihot esculenta HOM05D000926 ORTHO05D000707 5.8e-09 64.3 81 48.1
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 5.8e-09 64.3 81 44.4
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 9.9e-09 63.5 82 46.3
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.7e-08 62.8 93 41.9
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.7e-08 62.8 82 43.9
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 1.7e-08 62.8 82 42.7
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.2e-08 62.4 93 45.2
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 3.8e-08 61.6 98 44.9
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 6.4e-08 60.8 97 42.3
MBI15_g03197_MAGBIO Magnolia biondii HOM05D000926 ORTHO05D000707 8.4e-08 60.5 96 39.6
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 1.1e-07 60.1 84 38.1
Dinv33888 Davidia involucrata HOM05D000926 ORTHO05D000707 1.1e-07 60.1 85 40.0
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 1.1e-07 60.1 84 40.5
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 1.1e-07 60.1 82 46.3
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 1.4e-07 59.7 81 42.0
ECA232G3566 Erigeron canadensis HOM05D000926 ORTHO05D000707 1.4e-07 59.7 97 40.2
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.4e-07 59.7 82 46.3
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 1.4e-07 59.7 94 39.4
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.4e-07 59.7 93 43.0
PGR044G0045 Punica granatum HOM05D000926 ORTHO05D000707 1.4e-07 59.7 82 45.1
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 1.9e-07 59.3 81 43.2
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.4e-07 58.9 94 40.4
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 2.4e-07 58.9 94 42.6
Duzib084G1204 Durio zibethinus HOM05D000926 ORTHO05D000707 2.4e-07 58.9 81 42.0
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 2.4e-07 58.9 83 39.8
Manes.01G106100 Manihot esculenta HOM05D000926 ORTHO05D000707 2.4e-07 58.9 82 42.7
PSO063G3264 Papaver somniferum HOM05D000926 ORTHO05D000707 2.4e-07 58.9 90 41.1
PSO782G3113 Papaver somniferum HOM05D000926 ORTHO05D000707 2.4e-07 58.9 90 41.1
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 3.2e-07 58.5 93 38.7
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 3.2e-07 58.5 82 45.1
Potri.017G107100 Populus trichocarpa HOM05D000926 ORTHO05D000707 3.2e-07 58.5 82 40.2
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 3.2e-07 58.5 91 37.4
Ah.09g229670 Amaranthus hybridus HOM05D000926 ORTHO05D000707 4.2e-07 58.2 87 42.5
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 4.2e-07 58.2 84 39.3
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 4.2e-07 58.2 88 37.5
VMungo1309G0762 Vigna mungo HOM05D000926 ORTHO05D000707 4.2e-07 58.2 102 40.2
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 5.4e-07 57.8 87 40.2
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 5.4e-07 57.8 92 41.3
PGSC0003DMG400001479 Solanum tuberosum HOM05D000926 ORTHO05D000707 5.4e-07 57.8 97 36.1
PGSC0003DMG400029541 Solanum tuberosum HOM05D000926 ORTHO05D000707 5.4e-07 57.8 97 36.1
Glyma.04G058800 Glycine max HOM05D000926 ORTHO05D000707 7.1e-07 57.4 87 40.2
MELO3C018927.2 Cucumis melo HOM05D000926 ORTHO05D000707 9.3e-07 57.0 80 42.5
Medtr3g105690 Medicago truncatula HOM05D000926 ORTHO05D000707 9.3e-07 57.0 106 35.8
Nn4g23604 Nelumbo nucifera HOM05D000926 ORTHO05D000707 9.3e-07 57.0 96 40.6
PSO478G4837 Papaver somniferum HOM05D000926 ORTHO05D000707 9.3e-07 57.0 93 41.9
Phvul.009G085200 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 9.3e-07 57.0 102 40.2
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 9.3e-07 57.0 90 41.1
PGSC0003DMG400001476 Solanum tuberosum HOM05D000926 ORTHO05D000707 9.3e-07 57.0 87 41.4
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.2e-06 56.6 81 40.7
Lj7C741T14 Lonicera japonica HOM05D000926 ORTHO05D000707 1.2e-06 56.6 86 38.4
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.2e-06 56.6 82 40.2
Thecc.03G112300 Theobroma cacao HOM05D000926 ORTHO05D000707 1.2e-06 56.6 84 39.3
Aqoxy3G00594 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.6e-06 56.2 82 37.8
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.6e-06 56.2 84 40.5
Aqoxy3G03796 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.6e-06 56.2 93 43.0
AL7G27280 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 1.6e-06 56.2 87 40.2
Lju361C12T10 Lonicera japonica HOM05D000926 ORTHO05D000707 1.6e-06 56.2 95 42.1
MD17G1069200 Malus domestica HOM05D000926 ORTHO05D000707 1.6e-06 56.2 94 42.6
Oeu032515.1 Olea europaea HOM05D000926 ORTHO05D000707 1.6e-06 56.2 89 40.4
SalBow1G1369 Salvia bowleyana HOM05D000926 ORTHO05D000707 1.6e-06 56.2 82 41.5
Sopen02g034220 Solanum pennellii HOM05D000926 ORTHO05D000707 1.6e-06 56.2 97 35.1
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 2.1e-06 55.8 82 42.7
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 2.1e-06 55.8 82 42.7
Medtr1g013410 Medicago truncatula HOM05D000926 ORTHO05D000707 2.1e-06 55.8 90 33.3
PSO017G6561 Papaver somniferum HOM05D000926 ORTHO05D000707 2.1e-06 55.8 93 40.9
Solyc02g089480.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 2.1e-06 55.8 98 36.7
TPR.G38905 Trifolium pratense HOM05D000926 ORTHO05D000707 2.1e-06 55.8 86 33.7
Cpa.g.sc23.52 Carica papaya HOM05D000926 ORTHO05D000707 2.7e-06 55.5 87 41.4
Potri.004G108560 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.7e-06 55.5 80 45.0
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 2.7e-06 55.5 82 39.0
Ca_13080_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 3.5e-06 55.1 83 33.7
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 3.5e-06 55.1 92 39.1
PGR042G0931 Punica granatum HOM05D000926 ORTHO05D000707 3.5e-06 55.1 96 38.5
TPR.G15947 Trifolium pratense HOM05D000926 ORTHO05D000707 3.5e-06 55.1 80 43.8
Cc07_g04740 Coffea canephora HOM05D000926 ORTHO05D000707 4.6e-06 54.7 97 35.1
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.6e-06 54.7 82 41.5
Peaxi162Scf00479g00093 Petunia axillaris HOM05D000926 ORTHO05D000707 4.6e-06 54.7 100 40.0
TPR.G1895 Trifolium pratense HOM05D000926 ORTHO05D000707 4.6e-06 54.7 105 36.2
CiPaw.08G003900 Carya illinoinensis HOM05D000926 ORTHO05D000707 6.0e-06 54.3 89 39.3
DCAR_010990 Daucus carota HOM05D000926 ORTHO05D000707 6.0e-06 54.3 86 39.5
Glyma.06G059500 Glycine max HOM05D000926 ORTHO05D000707 6.0e-06 54.3 88 40.9
Prupe.3G245300 Prunus persica HOM05D000926 ORTHO05D000707 6.0e-06 54.3 95 37.9
Thecc.09G010900 Theobroma cacao HOM05D000926 ORTHO05D000707 6.0e-06 54.3 88 39.8
TPR.G38908 Trifolium pratense HOM05D000926 ORTHO05D000707 6.0e-06 54.3 86 37.2
Duzib084G0718 Durio zibethinus HOM05D059722 ORTHO05D044716 7.8e-06 53.9 96 35.4
Duzib187G1771 Durio zibethinus HOM05D000926 ORTHO05D000707 7.8e-06 53.9 87 36.8
HanXRQChr06g0179141 Helianthus annuus HOM05D000926 ORTHO05D000707 7.8e-06 53.9 89 37.1
Lalb_Chr21g0318771 Lupinus albus HOM05D000926 ORTHO05D000707 7.8e-06 53.9 84 36.9
Nn2g12621 Nelumbo nucifera HOM05D000926 ORTHO05D000707 7.8e-06 53.9 87 42.5
Nitab4.5_0009468g0010 Nicotiana tabacum HOM05D000926 ORTHO05D000707 7.8e-06 53.9 90 38.9
Sed0009643 Sechium edule HOM05D000926 ORTHO05D000707 7.8e-06 53.9 91 37.4


User provided reference genes

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