Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 3.2e-30 134.4 67 100.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.6e-10 68.9 61 60.7
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 4.8e-10 67.4 53 64.2
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.4e-09 65.9 55 60.0
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.4e-09 65.9 66 54.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.4e-09 65.9 66 54.5
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.8e-09 65.5 53 60.4
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.4e-09 65.1 53 58.5
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 2.4e-09 65.1 58 56.9
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 4.0e-09 64.3 54 61.1
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.0e-09 64.3 62 58.1
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 5.3e-09 63.9 60 63.3
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.0e-08 62.0 61 57.4
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.6e-08 61.6 46 65.2
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.6e-08 61.6 60 60.0
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.4e-08 61.2 64 53.1
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.4e-08 61.2 64 53.1
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 3.4e-08 61.2 61 59.0
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 3.4e-08 61.2 50 60.0
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.5e-08 60.8 60 60.0
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 5.8e-08 60.5 62 58.1
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 7.6e-08 60.1 54 51.9
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.0e-07 59.7 53 56.6
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.0e-07 59.7 53 56.6
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.3e-07 59.3 46 65.2
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.7e-07 58.9 69 53.6
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 1.7e-07 58.9 62 56.5
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.7e-07 58.9 61 54.1
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 2.2e-07 58.5 59 55.9
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 2.2e-07 58.5 57 54.4
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 3.8e-07 57.8 56 51.8
Nitab4.5_0000694g0130 Nicotiana tabacum HOM05D040682 ORTHO05D010089 4.9e-07 57.4 57 50.9
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 6.5e-07 57.0 43 65.1
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 6.5e-07 57.0 65 50.8
Cc11_g09680 Coffea canephora HOM05D008114 ORTHO05D010089 1.1e-06 56.2 62 51.6
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 1.1e-06 56.2 52 55.8
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 1.1e-06 56.2 48 58.3
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 1.4e-06 55.8 47 63.8
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 2.5e-06 55.1 61 57.4
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 3.2e-06 54.7 63 60.3
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 4.2e-06 54.3 47 59.6
Sed0006257 Sechium edule HOM05D022275 ORTHO05D010089 4.2e-06 54.3 59 49.2
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.1e-06 53.5 61 49.2
Nitab4.5_0002112g0070 Nicotiana tabacum HOM05D040682 ORTHO05D010089 7.1e-06 53.5 58 50.0
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 7.1e-06 53.5 47 59.6
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 7.1e-06 53.5 51 56.9


User provided reference genes

Program Settings