Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.7e-110 401.7 232 100.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 9.0e-48 194.5 229 57.6
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.2e-37 159.5 225 54.7
CSS0042020 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 7.9e-36 154.8 80 96.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 6.9e-32 141.7 223 47.5
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.5e-31 140.6 223 50.2
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 4.5e-31 139.0 206 55.8
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 3.8e-30 136.0 223 47.5
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 3.8e-30 136.0 217 46.1
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 4.2e-29 132.5 227 39.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.2e-28 131.0 223 40.4
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 6.0e-28 128.6 231 44.2
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 7.9e-28 128.3 228 45.6
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.3e-27 127.5 67 100.0
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 1.8e-27 127.1 177 55.9
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.3e-27 126.7 123 69.9
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 3.9e-27 125.9 228 38.6
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 6.7e-27 125.2 220 43.2
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 6.7e-27 125.2 218 44.5
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 8.7e-27 124.8 228 38.2
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.6e-25 120.6 227 38.8
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 8.2e-25 118.2 215 45.1
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 1.8e-24 117.1 228 46.9
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 1.8e-24 117.1 229 45.0
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 2.4e-24 116.7 140 60.0
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 4.1e-24 115.9 235 41.3
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 5.3e-24 115.5 108 83.3
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 9.0e-24 114.8 142 54.9
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 2.6e-23 113.2 219 45.2
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 3.4e-23 112.8 229 44.1
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 1.0e-22 111.3 162 55.6
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 1.0e-22 111.3 162 55.6
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 3.8e-22 109.4 222 40.5
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 5.0e-22 109.0 165 41.8
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 8.5e-22 108.2 230 33.9
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 2.5e-21 106.7 147 52.4
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 3.2e-21 106.3 224 49.6
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 4.2e-21 105.9 160 52.5
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 4.2e-21 105.9 146 54.8
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 5.5e-21 105.5 224 41.5
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 9.4e-21 104.8 181 45.3
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 9.4e-21 104.8 138 50.7
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 1.2e-20 104.4 138 40.6
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 2.7e-20 103.2 138 39.9
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 4.6e-20 102.4 188 45.7
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.0e-19 101.3 131 59.5
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.0e-19 101.3 160 50.6
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 1.4e-19 100.9 232 34.9
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 3.0e-19 99.8 213 42.7
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 6.7e-19 98.6 157 45.9
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 6.7e-19 98.6 228 42.5
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 8.8e-19 98.2 145 55.9
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.1e-18 97.8 195 44.1
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.5e-18 97.4 138 52.9
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.5e-18 97.4 228 39.9
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 2.5e-18 96.7 187 48.1
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 3.3e-18 96.3 138 41.3
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 4.3e-18 95.9 195 39.0
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 7.4e-18 95.1 159 49.1
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 9.7e-18 94.7 152 50.7
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 3.7e-17 92.8 218 43.1
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 3.7e-17 92.8 213 30.0
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 4.8e-17 92.4 152 34.9
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 6.3e-17 92.0 147 34.7
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.8e-16 90.5 159 32.7
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 5.3e-16 89.0 147 51.0
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 9.1e-16 88.2 229 39.7
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 1.5e-15 87.4 127 54.3
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 5.9e-15 85.5 227 34.8
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 1.0e-14 84.7 146 34.9
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.0e-14 84.7 171 42.1
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.2e-14 83.6 135 45.9
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 2.2e-14 83.6 120 51.7
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 8.5e-14 81.6 157 40.1
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 2.5e-13 80.1 123 44.7
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 3.2e-13 79.7 174 42.5
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 9.4e-13 78.2 68 58.8
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 9.4e-13 78.2 136 46.3
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.2e-12 77.8 149 37.6
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 1.6e-12 77.4 140 41.4
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 3.9e-11 72.8 65 56.9
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 2.0e-10 70.5 180 42.8
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 2.6e-10 70.1 123 39.8
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 3.3e-10 69.7 144 45.1
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 3.3e-10 69.7 63 55.6
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 7.4e-10 68.6 134 47.0
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 7.4e-10 68.6 185 40.0
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 9.7e-10 68.2 110 56.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.2e-09 67.0 115 47.0
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 3.7e-09 66.2 152 31.6
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 4.8e-09 65.9 119 53.8
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.8e-09 65.9 122 45.9
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 8.2e-09 65.1 129 44.2
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 8.2e-09 65.1 130 29.2
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 1.4e-08 64.3 110 51.8
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 1.8e-08 63.9 67 50.7
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.1e-08 63.2 129 41.9
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 4.1e-08 62.8 153 33.3
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 4.1e-08 62.8 153 33.3
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 4.1e-08 62.8 139 43.2
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 5.3e-08 62.4 137 40.1
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 7.0e-08 62.0 152 31.6
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 7.0e-08 62.0 127 49.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 9.1e-08 61.6 148 39.9
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.2e-07 61.2 125 44.8
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 1.5e-07 60.8 152 32.2
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.5e-07 60.8 134 41.0
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.5e-07 60.8 146 43.8
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 2.0e-07 60.5 106 53.8
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.6e-07 60.1 132 43.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.6e-07 60.1 127 43.3
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.6e-07 60.1 127 43.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.5e-07 59.3 127 42.5
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.9e-07 58.9 124 29.0
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.9e-07 58.9 124 29.0
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.7e-07 58.5 178 36.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-06 58.2 127 42.5
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.0e-06 58.2 141 38.3
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.0e-06 58.2 140 45.7
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.3e-06 57.8 120 43.3
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.7e-06 57.4 129 44.2
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.2e-06 57.0 119 45.4
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.9e-06 56.6 182 33.0
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 3.8e-06 56.2 123 28.5
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 3.8e-06 56.2 127 43.3
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 3.8e-06 56.2 138 39.9
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 3.8e-06 56.2 110 48.2
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.8e-06 56.2 118 44.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 5.0e-06 55.8 147 37.4
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 5.0e-06 55.8 112 44.6
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 6.5e-06 55.5 111 29.7


User provided reference genes

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