Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.6e-124 449.5 246 100.0
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.8e-75 286.6 227 70.5
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.7e-58 229.6 190 68.4
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 7.8e-58 228.0 254 56.3
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.0e-54 217.6 227 58.1
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 3.2e-51 206.1 235 52.3
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 2.0e-50 203.4 236 56.8
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 9.5e-48 194.5 252 49.2
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.1e-46 191.0 248 50.4
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 1.2e-45 187.6 281 43.4
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.7e-44 183.7 249 47.8
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.9e-43 180.3 251 46.2
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 7.1e-43 178.3 275 44.7
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.1e-42 176.8 243 46.9
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 6.0e-42 175.3 284 43.3
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.0e-41 174.5 233 46.4
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.9e-40 170.2 234 45.7
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.3e-40 168.3 234 46.2
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.6e-39 167.2 236 44.5
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.6e-39 167.2 202 50.5
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 2.8e-39 166.4 247 42.9
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.3e-38 163.3 235 46.4
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 5.2e-38 162.2 237 47.7
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 6.8e-38 161.8 242 43.8
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.2e-37 161.0 268 41.4
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.0e-37 160.2 246 43.1
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 5.8e-37 158.7 237 42.6
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.3e-36 157.5 295 38.3
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.3e-36 157.5 314 36.6
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 1.4e-35 154.1 241 43.6
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.4e-35 154.1 242 43.4
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.4e-35 154.1 251 43.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.2e-34 151.0 233 46.8
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-34 151.0 237 42.6
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.6e-34 150.6 207 47.8
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.6e-34 150.6 237 42.2
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.7e-34 149.8 241 41.1
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.5e-34 149.4 221 43.9
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 3.5e-34 149.4 251 45.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 6.0e-34 148.7 246 42.3
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 6.0e-34 148.7 243 44.0
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 6.0e-34 148.7 242 40.9
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 3.9e-33 146.0 228 47.4
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.1e-32 144.4 253 43.1
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.5e-32 144.1 234 41.9
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.5e-32 144.1 234 41.9
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 2.5e-32 143.3 251 39.4
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 4.3e-32 142.5 234 41.9
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 5.6e-32 142.1 232 40.5
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 5.6e-32 142.1 260 41.5
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 7.3e-32 141.7 232 40.5
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 9.6e-32 141.4 252 41.7
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 9.6e-32 141.4 222 43.7
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 4.7e-31 139.0 159 50.9
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.1e-30 137.9 178 48.3
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.4e-30 137.5 181 51.4
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 2.4e-30 136.7 229 43.7
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 5.2e-30 135.6 244 38.5
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 5.2e-30 135.6 272 39.3
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 8.9e-30 134.8 227 45.4
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.5e-29 134.0 244 43.0
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.0e-29 133.7 227 45.4
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 2.6e-29 133.3 243 37.4
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 3.4e-29 132.9 227 43.6
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 5.8e-29 132.1 233 44.2
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 9.9e-29 131.3 233 44.6
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.3e-28 131.0 242 38.0
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 6.4e-28 128.6 231 42.4
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 1.1e-27 127.9 242 40.5
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.9e-27 127.1 233 42.5
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 3.2e-27 126.3 239 40.2
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 3.2e-27 126.3 290 34.5
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 9.3e-27 124.8 244 36.9
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.2e-26 124.4 244 37.3
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.6e-26 124.0 245 35.9
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 4.6e-26 122.5 254 37.0
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 6.0e-26 122.1 236 37.7
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.3e-25 120.9 311 34.1
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 5.1e-25 119.0 242 37.6
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.1e-24 117.9 189 45.5
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 1.9e-24 117.1 208 40.9
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 3.3e-24 116.3 238 41.2
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 1.6e-23 114.0 169 43.2
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 4.8e-23 112.5 104 64.4
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 4.8e-23 112.5 104 64.4
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.1e-22 111.3 224 35.7
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 1.1e-22 111.3 104 56.7
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 6.9e-22 108.6 252 36.5
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 9.0e-22 108.2 171 42.7
Actinidia26606 Actinidia chinensis HOM05D002116 ORTHO05D002438 3.8e-20 102.8 100 58.0
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 3.8e-20 102.8 184 39.1
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 8.4e-20 101.7 218 38.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.9e-19 100.5 80 62.5
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.1e-19 98.6 63 76.2
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 2.7e-18 96.7 223 34.1
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 7.9e-18 95.1 216 36.1
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 3.8e-12 76.3 53 77.4
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 4.9e-12 75.9 255 29.4
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.9e-09 66.2 94 45.7
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 2.5e-08 63.5 121 37.2
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.4e-06 57.0 89 40.4


User provided reference genes

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