Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 2.0e-65 252.3 130 100.0
Actinidia29169 Actinidia chinensis HOM05D007866 ORTHO05D003871 6.8e-29 131.0 141 56.7
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 3.5e-25 118.6 150 52.7
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 3.1e-21 105.5 140 45.7
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 5.2e-21 104.8 154 46.8
Haze_20881 Corylus avellana HOM05D007866 ORTHO05D003871 8.9e-21 104.0 154 46.1
Haze_20890 Corylus avellana HOM05D007866 ORTHO05D003871 8.9e-21 104.0 154 46.1
Dinv35543 Davidia involucrata HOM05D007866 ORTHO05D003871 1.3e-19 100.1 120 51.7
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 2.9e-19 99.0 165 43.6
Rhsim05G0199600 Rhododendron simsii HOM05D007866 ORTHO05D003871 4.9e-19 98.2 131 49.6
Thecc.05G029400 Theobroma cacao HOM05D007866 ORTHO05D003871 8.4e-19 97.4 163 39.9
Manes.09G098200 Manihot esculenta HOM05D007866 ORTHO05D003871 1.4e-18 96.7 155 43.2
QL07p028342 Quercus lobata HOM05D007866 ORTHO05D003871 1.9e-18 96.3 159 45.3
COL.COLO4_14698 Corchorus olitorius HOM05D007866 ORTHO05D003871 3.2e-18 95.5 149 45.6
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 4.2e-18 95.1 164 42.1
Potri.016G103700 Populus trichocarpa HOM05D007866 ORTHO05D003871 1.6e-17 93.2 162 43.2
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 1.6e-17 93.2 134 50.0
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 2.1e-17 92.8 142 42.3
Ciclev10013493m.g Citrus clementina HOM05D007866 ORTHO05D003871 2.1e-17 92.8 152 42.8
Prupe.6G264300 Prunus persica HOM05D007866 ORTHO05D003871 3.5e-17 92.0 154 43.5
MD12G1154500 Malus domestica HOM05D007866 ORTHO05D003871 7.8e-17 90.9 141 46.8
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 1.7e-16 89.7 132 48.5
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 1.7e-16 89.7 132 48.5
Gohir.D09G148200 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.7e-16 89.7 149 41.6
Gorai.006G169200 Gossypium raimondii HOM05D007866 ORTHO05D003871 2.3e-16 89.4 149 40.9
VMungo0331G0444 Vigna mungo HOM05D007866 ORTHO05D003871 5.1e-16 88.2 167 38.9
Gohir.A09G152500 Gossypium hirsutum HOM05D007866 ORTHO05D003871 6.6e-16 87.8 149 40.9
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 6.6e-16 87.8 130 41.5
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.5e-15 86.7 114 43.9
PGSC0003DMG400019193 Solanum tuberosum HOM05D007866 ORTHO05D003871 1.9e-15 86.3 115 44.3
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 2.5e-15 85.9 130 42.3
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 4.3e-15 85.1 133 48.1
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 5.6e-15 84.7 134 48.5
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 5.6e-15 84.7 176 37.5
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 9.6e-15 84.0 107 44.9
Duzib128G0987 Durio zibethinus HOM05D007866 ORTHO05D003871 1.3e-14 83.6 163 38.0
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 1.6e-14 83.2 129 42.6
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 1.6e-14 83.2 149 40.3
Glyma.01G105300 Glycine max HOM05D007866 ORTHO05D003871 1.6e-14 83.2 169 41.4
Psat7g241400 Pisum sativum HOM05D007866 ORTHO05D003871 2.8e-14 82.4 159 36.5
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 3.6e-14 82.0 102 46.1
ClCG04G007660 Citrullus lanatus HOM05D007866 ORTHO05D003871 4.8e-14 81.6 131 42.0
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 4.8e-14 81.6 112 42.0
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 8.1e-14 80.9 129 41.9
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 8.1e-14 80.9 134 40.3
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 8.1e-14 80.9 149 38.9
Phvul.010G009300 Phaseolus vulgaris HOM05D007866 ORTHO05D003871 1.8e-13 79.7 111 45.0
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 1.8e-13 79.7 160 40.0
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 2.4e-13 79.3 130 39.2
Carub.0003s0839 Capsella rubella HOM05D007866 ORTHO05D003871 3.1e-13 79.0 122 44.3
DCAR_012139 Daucus carota HOM05D007866 ORTHO05D003871 4.0e-13 78.6 115 47.0
Glyma.03G073100 Glycine max HOM05D007866 ORTHO05D003871 4.0e-13 78.6 168 38.7
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 4.0e-13 78.6 134 39.6
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 6.9e-13 77.8 137 40.9
TAR633G1409 Trochodendron aralioides HOM05D007866 ORTHO05D003871 1.2e-12 77.0 100 46.0
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 2.0e-12 76.3 123 41.5
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 2.6e-12 75.9 121 43.0
Lsat_1_v5_gn_8_84120 Lactuca sativa HOM05D007866 ORTHO05D003871 3.4e-12 75.5 140 37.9
AT3G09280 Arabidopsis thaliana HOM05D007866 ORTHO05D003871 4.4e-12 75.1 121 40.5
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 7.6e-12 74.3 118 40.7
AL3G20400 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 2.2e-11 72.8 121 39.7
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 2.2e-11 72.8 158 34.2
BraA03t12778Z Brassica rapa HOM05D007866 ORTHO05D003871 1.1e-10 70.5 121 41.3
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 1.4e-10 70.1 121 39.7
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 1.9e-10 69.7 131 40.5
BcaB04g18538 Brassica carinata HOM05D007866 ORTHO05D003871 2.4e-10 69.3 67 56.7
BcaB04g18539 Brassica carinata HOM05D007866 ORTHO05D003871 2.4e-10 69.3 67 56.7
DCAR_010424 Daucus carota HOM05D007866 ORTHO05D003871 2.4e-10 69.3 100 44.0
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.4e-10 69.3 126 38.1
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.4e-10 69.3 126 38.1
TPR.G32547 Trifolium pratense HOM05D007866 ORTHO05D003871 2.4e-10 69.3 151 33.1
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 7.1e-10 67.8 43 74.4
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 7.1e-10 67.8 43 74.4
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.2e-09 67.0 127 38.6
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.2e-09 67.0 127 38.6
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 2.1e-09 66.2 124 37.1
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.7e-09 65.9 124 37.1
Sp3g07650 Schrenkiella parvula HOM05D007866 ORTHO05D003871 2.7e-09 65.9 121 38.8
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 3.5e-09 65.5 130 39.2
Medtr4g019600 Medicago truncatula HOM05D007866 ORTHO05D003871 6.0e-09 64.7 149 34.9
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 6.0e-09 64.7 125 32.0
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 6.0e-09 64.7 127 36.2
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 7.8e-09 64.3 124 35.5
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 1.3e-08 63.5 126 39.7
EL10Ac7g16230 Beta vulgaris HOM05D007866 ORTHO05D003871 2.3e-08 62.8 98 40.8
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 2.3e-08 62.8 132 34.1
PGR031G1324 Punica granatum HOM05D007866 ORTHO05D003871 2.3e-08 62.8 152 30.3
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 3.0e-08 62.4 72 44.4
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 3.0e-08 62.4 127 33.9
DCAR_028812 Daucus carota HOM05D007866 ORTHO05D003871 3.9e-08 62.0 152 32.9
ECA236G0848 Erigeron canadensis HOM05D007866 ORTHO05D003871 3.9e-08 62.0 95 35.8
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 5.1e-08 61.6 72 45.8
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 6.6e-08 61.2 68 47.1
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 8.7e-08 60.8 38 71.1
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 8.7e-08 60.8 38 71.1
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 1.1e-07 60.5 80 41.2
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 1.5e-07 60.1 38 68.4
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 1.5e-07 60.1 98 42.9
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 1.9e-07 59.7 123 35.8
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.9e-07 59.7 128 33.6
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 1.9e-07 59.7 126 38.1
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 1.9e-07 59.7 127 31.5
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 2.5e-07 59.3 44 56.8
arahy.Tifrunner.gnm1.ann1.UGPP85 Arachis hypogaea HOM05D007866 ORTHO05D003871 3.3e-07 58.9 36 72.2
Dinv18957 Davidia involucrata HOM05D007156 ORTHO05D003871 3.3e-07 58.9 50 56.0
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 3.3e-07 58.9 44 59.1
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 3.3e-07 58.9 39 66.7
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 3.3e-07 58.9 122 37.7
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 4.3e-07 58.5 125 34.4
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 4.3e-07 58.5 72 47.2
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 4.3e-07 58.5 129 37.2
Zm00001eb323610 Zea mays HOM05D052182 ORTHO05D003871 4.3e-07 58.5 90 41.1
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 5.6e-07 58.2 44 61.4
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 5.6e-07 58.2 125 36.8
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 7.3e-07 57.8 38 71.1
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 7.3e-07 57.8 81 39.5
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 7.3e-07 57.8 38 65.8
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 9.6e-07 57.4 78 43.6
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 9.6e-07 57.4 126 34.1
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 9.6e-07 57.4 49 53.1
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 1.3e-06 57.0 127 35.4
Nn2g11287 Nelumbo nucifera HOM05D007156 ORTHO05D003871 1.3e-06 57.0 42 50.0
Nitab4.5_0000119g0400 Nicotiana tabacum HOM05D051541 ORTHO05D003871 1.3e-06 57.0 118 35.6
Os07g0549100 Oryza sativa ssp. japonica HOM05D052182 ORTHO05D003871 1.3e-06 57.0 45 57.8
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 1.3e-06 57.0 38 63.2
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 1.6e-06 56.6 38 63.2
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 1.6e-06 56.6 124 35.5
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 2.1e-06 56.2 53 49.1
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 2.1e-06 56.2 87 42.5
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.1e-06 56.2 87 42.5
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.1e-06 56.2 87 42.5
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.1e-06 56.2 87 42.5
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 2.1e-06 56.2 41 58.5
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 2.8e-06 55.8 121 30.6
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 2.8e-06 55.8 42 54.8
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 3.6e-06 55.5 129 37.2
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 3.6e-06 55.5 84 42.9
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 3.6e-06 55.5 98 34.7
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 3.6e-06 55.5 126 34.9
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 6.2e-06 54.7 58 46.6
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 6.2e-06 54.7 73 42.5
HanXRQChr06g0177631 Helianthus annuus HOM05D007866 ORTHO05D003871 6.2e-06 54.7 35 62.9
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 6.2e-06 54.7 75 38.7
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 6.2e-06 54.7 41 63.4
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 6.2e-06 54.7 42 61.9
PGSC0003DMG400021719 Solanum tuberosum HOM05D001601 ORTHO05D006936 6.2e-06 54.7 45 48.9
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 8.1e-06 54.3 38 63.2


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