Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 5.4e-153 544.3 273 100.0
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 6.7e-119 431.0 274 80.3
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 8.8e-111 404.1 253 81.0
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 5.7e-110 401.4 273 75.5
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 1.9e-105 386.3 273 70.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 9.7e-102 374.0 273 71.4
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.3e-101 373.6 273 68.1
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 3.1e-100 369.0 273 68.1
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.1e-100 368.6 273 65.9
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.6e-99 366.7 273 70.7
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 3.5e-99 365.5 273 69.6
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 2.9e-98 362.5 273 69.2
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.8e-98 362.1 274 68.6
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 3.8e-98 362.1 273 69.2
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 8.5e-98 360.9 273 68.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.6e-96 356.7 273 68.1
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.6e-96 356.7 273 66.3
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 2.1e-96 356.3 273 67.0
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 4.7e-96 355.1 274 66.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.0e-95 354.0 273 67.4
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 1.4e-95 353.6 273 67.0
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 6.7e-95 351.3 273 64.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 8.8e-95 350.9 273 67.0
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 8.8e-95 350.9 273 67.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.2e-94 350.5 273 64.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.2e-94 350.5 274 66.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.0e-94 349.7 272 65.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.6e-94 349.4 251 69.3
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.3e-94 349.0 273 64.5
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.3e-93 347.1 273 64.5
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.7e-93 346.7 276 65.2
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.3e-93 344.7 273 63.7
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.1e-92 344.0 273 64.1
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-92 343.6 274 65.7
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-92 343.6 274 65.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.4e-92 342.8 273 63.0
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 5.3e-92 341.7 273 66.3
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 9.1e-92 340.9 273 64.5
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.3e-90 337.0 273 61.5
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.2e-90 336.3 274 63.9
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.5e-89 332.8 273 63.0
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 4.7e-88 328.6 273 62.3
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 6.1e-88 328.2 275 61.1
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 8.0e-88 327.8 246 67.1
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 8.0e-88 327.8 245 66.1
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.0e-87 325.5 193 85.0
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 4.0e-87 325.5 216 75.0
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 6.8e-87 324.7 273 60.4
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 3.4e-86 322.4 273 61.2
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.2e-85 319.7 275 59.3
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 8.3e-85 317.8 239 65.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.4e-84 317.0 277 60.3
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.8e-84 316.6 274 60.2
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 2.0e-83 313.2 273 56.8
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 3.5e-83 312.4 273 58.6
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 5.0e-82 308.5 274 57.7
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 6.6e-82 308.1 245 62.4
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 5.5e-81 305.1 275 59.3
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 3.6e-80 302.4 275 57.5
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.7e-80 302.0 275 56.7
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 8.0e-80 301.2 246 57.7
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 6.8e-79 298.1 275 58.2
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.2e-78 297.4 274 58.0
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 3.4e-78 295.8 275 56.0
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.9e-77 292.0 275 55.3
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 6.3e-77 291.6 276 55.1
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 8.3e-77 291.2 275 55.6
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 5.4e-76 288.5 275 54.9
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 7.0e-76 288.1 273 56.0
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-75 287.3 277 55.6
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-75 287.3 277 55.6
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 2.0e-75 286.6 279 54.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 2.0e-75 286.6 279 54.8
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 3.9e-74 282.3 240 62.1
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 5.0e-74 282.0 219 61.2
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 1.9e-73 280.0 282 55.0
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 9.5e-73 277.7 274 54.7
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.1e-72 276.6 283 55.1
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.8e-72 276.2 275 55.6
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.0e-71 274.2 277 53.4
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 1.4e-71 273.9 279 52.0
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 2.0e-70 270.0 276 52.9
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 3.4e-70 269.2 275 55.6
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 2.7e-67 259.6 278 51.4
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 7.8e-67 258.1 278 51.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.5e-62 243.8 273 52.0
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 7.5e-62 241.5 240 55.4
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 5.4e-60 235.3 274 50.0
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.6e-59 233.8 272 47.8
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 3.3e-57 226.1 271 45.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.1e-56 223.4 276 46.4
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.8e-56 223.0 278 48.2
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.8e-56 223.0 278 48.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.6e-54 216.5 271 44.6
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 5.8e-54 215.3 162 67.3
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 9.9e-54 214.5 274 47.1
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 6.4e-53 211.8 273 47.3
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.4e-52 210.7 275 45.8
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.1e-51 206.8 246 48.4
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.0e-50 203.0 235 49.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.9e-50 202.6 264 43.6
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.5e-49 200.7 272 43.4
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 8.4e-45 184.9 202 48.5
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.4e-44 183.3 275 41.5
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.4e-44 183.3 202 48.0
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.4e-39 166.8 243 41.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.6e-32 144.1 238 36.1
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 4.8e-32 142.5 161 49.1
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.0e-30 137.1 244 38.1
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 1.1e-28 131.3 226 38.5
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 2.5e-25 120.2 246 35.4
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 2.5e-25 120.2 222 38.7
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 4.3e-25 119.4 112 59.8
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.4e-23 114.4 93 60.2
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.0e-22 110.5 220 35.0
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 3.4e-22 109.8 124 46.0
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 6.0e-19 99.0 108 47.2
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 5.1e-18 95.9 106 47.2
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-10 71.2 53 60.4
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 4.3e-09 66.2 63 54.0


User provided reference genes

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