Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047865 Camellia sinensis var. sinensis HOM05D000223 ORTHO05D109182 6.0e-31 136.7 63 100.0
Sc25g0000830 Simmondsia chinensis HOM05D000223 ORTHO05D001289 1.0e-06 56.2 31 80.6
Dinv05474 Davidia involucrata HOM05D000223 ORTHO05D001289 1.8e-06 55.5 26 96.2
Eucgr.A01489 Eucalyptus grandis HOM05D000223 ORTHO05D001289 1.8e-06 55.5 26 96.2
CiPaw.05G256700 Carya illinoinensis HOM05D000223 ORTHO05D001289 3.9e-06 54.3 26 92.3
Prupe.2G308600 Prunus persica HOM05D000223 ORTHO05D001289 3.9e-06 54.3 27 85.2
QL09p010558 Quercus lobata HOM05D000223 ORTHO05D001289 3.9e-06 54.3 26 92.3
Duzib068G0602 Durio zibethinus HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 92.3
Migut.F01042 Erythranthe guttata HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 88.5
Gohir.A08G095700 Gossypium hirsutum HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 92.3
Gohir.D08G107800 Gossypium hirsutum HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 92.3
Gorai.004G115400 Gossypium raimondii HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 92.3
Gorai.008G270000 Gossypium raimondii HOM05D000223 ORTHO05D001289 5.1e-06 53.9 36 66.7
Thecc.03G194300 Theobroma cacao HOM05D000223 ORTHO05D001289 5.1e-06 53.9 26 92.3
PSO063G1505 Papaver somniferum HOM05D000223 ORTHO05D001289 6.7e-06 53.5 26 92.3
PSO170G6582 Papaver somniferum HOM05D000223 ORTHO05D001289 6.7e-06 53.5 26 92.3
Potri.015G019200 Populus trichocarpa HOM05D000223 ORTHO05D001289 6.7e-06 53.5 28 85.7
PGR042G0483 Punica granatum HOM05D000223 ORTHO05D001289 6.7e-06 53.5 26 88.5
Sabra15G0014600 Salix brachista HOM05D000223 ORTHO05D001289 6.7e-06 53.5 28 85.7
CAN.G108.39 Capsicum annuum HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3
Cpa.g.sc405.2 Carica papaya HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3
Lsat_1_v5_gn_8_4981 Lactuca sativa HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 88.5
Lj3A908G66 Lonicera japonica HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3
Nitab4.5_0005134g0010 Nicotiana tabacum HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3
Nitab4.5_0009157g0020 Nicotiana tabacum HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3
Oeu041340.1 Olea europaea HOM05D000223 ORTHO05D001289 8.8e-06 53.1 26 92.3


User provided reference genes

Program Settings