Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.3e-209 731.1 375 100.0
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.5e-187 658.3 342 99.4
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 4.5e-166 588.2 375 81.1
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 5.9e-166 587.8 365 82.7
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 5.5e-164 581.3 365 81.9
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 2.4e-151 539.3 365 74.8
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.4e-143 513.5 365 71.8
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.8e-143 513.1 363 74.1
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.3e-138 496.1 366 69.9
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 5.2e-138 495.0 339 75.2
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 5.7e-137 491.5 365 67.1
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.1e-135 487.3 365 68.5
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 4.1e-135 485.3 365 67.1
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 2.0e-134 483.0 363 67.5
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 4.5e-134 481.9 365 68.5
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.8e-134 481.1 365 68.5
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.3e-133 480.3 346 71.7
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.3e-133 479.6 365 67.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.9e-132 476.5 360 68.3
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.9e-132 476.5 365 66.3
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 2.5e-132 476.1 367 67.6
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.3e-132 474.6 365 67.1
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 4.0e-130 468.8 366 65.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.2e-129 467.2 365 65.5
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 8.3e-128 461.1 365 64.9
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-127 460.7 365 64.7
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.4e-127 460.3 366 65.3
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.4e-127 460.3 366 65.3
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.9e-127 459.9 365 64.4
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.9e-127 459.9 364 64.6
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 3.2e-127 459.1 366 64.5
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 1.6e-126 456.8 365 64.4
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.7e-125 453.4 365 63.6
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.7e-125 453.4 366 64.5
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 4.7e-123 445.3 367 62.9
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 2.3e-122 443.0 366 61.7
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 8.9e-122 441.0 367 61.0
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.2e-121 440.7 366 62.6
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 2.0e-121 439.9 366 62.3
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 5.8e-121 438.3 365 62.2
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.7e-120 436.8 366 62.3
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 8.3e-120 434.5 365 63.3
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.2e-118 430.6 369 59.6
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 2.1e-118 429.9 366 61.2
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 6.0e-118 428.3 369 61.2
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 6.0e-118 428.3 363 61.2
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.0e-117 427.6 368 60.3
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 3.3e-116 422.5 365 58.9
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 3.3e-116 422.5 363 61.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 9.5e-116 421.0 365 60.0
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 4.4e-113 412.1 365 59.5
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 5.8e-113 411.8 320 66.9
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 7.5e-113 411.4 365 57.5
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.4e-111 407.1 345 60.9
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 6.0e-110 401.7 347 61.4
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 6.6e-109 398.3 362 58.0
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 8.6e-109 397.9 257 81.7
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 8.1e-107 391.3 323 63.8
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 2.4e-106 389.8 367 55.6
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.6e-105 386.3 302 65.2
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 4.9e-104 382.1 363 55.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 8.4e-104 381.3 379 53.3
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 4.6e-102 375.6 366 54.9
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.7e-101 373.6 362 55.0
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.5e-100 370.5 366 54.6
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 5.6e-100 368.6 363 53.7
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 9.0e-98 361.3 249 75.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 5.8e-97 358.6 365 52.6
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.7e-93 347.1 366 51.1
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.3e-93 346.7 366 50.5
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.1e-92 344.4 369 53.9
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 2.8e-91 339.7 375 49.1
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 3.4e-89 332.8 247 68.4
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.4e-89 332.8 377 49.1
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.3e-88 330.9 365 49.6
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.7e-88 330.5 389 47.3
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 9.3e-87 324.7 365 49.0
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.6e-86 323.9 237 75.1
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.7e-86 323.2 365 49.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 4.6e-86 322.4 483 42.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.0e-85 319.7 375 46.7
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 3.0e-85 319.7 375 47.5
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.5e-84 317.4 365 47.7
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.3e-83 314.3 367 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.2e-78 297.7 247 63.6
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.1e-78 297.0 365 46.0
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 2.8e-75 286.6 258 58.9
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 3.7e-75 286.2 367 46.0
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.3e-69 266.9 366 43.2
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.7e-65 251.9 362 42.0
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 9.4e-63 245.0 377 41.1
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 5.1e-53 212.6 364 38.7
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-50 204.9 367 37.9
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.1e-50 204.9 367 37.9
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 2.1e-46 190.7 248 45.2
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 4.7e-46 189.5 143 68.5
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.0e-40 171.8 116 66.4
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.1e-38 164.1 118 71.2
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.6e-38 163.3 367 35.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 3.6e-38 163.3 205 47.3
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 6.1e-38 162.5 169 50.9
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.3e-35 154.8 318 36.8
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 7.0e-34 149.1 311 36.7
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 7.0e-34 149.1 151 55.0
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 4.0e-29 133.3 114 52.6
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.0e-29 133.3 149 55.0
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 5.7e-28 129.4 414 28.5
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.6e-24 115.9 114 58.8
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.8e-22 110.5 100 57.0
Hma1.2p1_0979F.1_g243630 Hydrangea macrophylla HOM05D003435 ORTHO05D004032 7.3e-07 59.3 76 50.0
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 6.2e-06 56.2 124 34.7


User provided reference genes

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