Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.7e-35 152.1 76 100.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.2e-20 102.8 53 94.3
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.2e-20 102.8 54 92.6
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.3e-19 99.4 64 76.6
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.3e-19 99.4 64 76.6
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.2e-19 98.6 53 90.6
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 2.9e-19 98.2 54 87.0
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 4.9e-19 97.4 54 85.2
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 6.4e-19 97.1 53 86.8
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 6.4e-19 97.1 53 86.8
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 8.3e-19 96.7 54 79.6
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 8.3e-19 96.7 60 76.7
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 8.3e-19 96.7 54 83.3
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.1e-18 96.3 53 84.9
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.1e-18 96.3 54 83.3
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 1.4e-18 95.9 54 85.2
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.4e-18 95.9 53 88.7
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.9e-18 95.5 53 84.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 2.4e-18 95.1 54 85.2
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.2e-18 94.7 53 83.0
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.2e-18 94.7 54 81.5
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 4.1e-18 94.4 53 83.0
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 4.1e-18 94.4 53 83.0
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.1e-18 94.4 53 83.0
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 5.4e-18 94.0 53 84.9
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 5.4e-18 94.0 53 81.1
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 5.4e-18 94.0 53 83.0
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 5.4e-18 94.0 53 83.0
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 5.4e-18 94.0 53 83.0
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 7.1e-18 93.6 53 81.1
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 7.1e-18 93.6 53 81.1
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 7.1e-18 93.6 53 83.0
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 9.2e-18 93.2 54 77.8
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 9.2e-18 93.2 53 83.0
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.2e-17 92.8 54 77.8
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.2e-17 92.8 53 83.0
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 1.2e-17 92.8 54 81.5
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.6e-17 92.4 53 81.1
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 1.6e-17 92.4 53 79.2
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 79.2
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 79.2
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 77.4
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 81.1
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 81.1
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 81.1
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 81.1
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 2.1e-17 92.0 53 81.1
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 2.7e-17 91.7 53 79.2
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 2.7e-17 91.7 53 77.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 3.5e-17 91.3 53 81.1
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 3.5e-17 91.3 47 95.7
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 3.5e-17 91.3 53 86.8
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 4.6e-17 90.9 53 81.1
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 4.6e-17 90.9 53 75.5
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 6.0e-17 90.5 53 79.2
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 6.0e-17 90.5 53 77.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 7.8e-17 90.1 53 77.4
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 7.8e-17 90.1 53 83.0
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 7.8e-17 90.1 53 83.0
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 7.8e-17 90.1 53 79.2
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 7.8e-17 90.1 52 78.8
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.0e-16 89.7 54 79.6
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.0e-16 89.7 68 69.1
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.3e-16 89.4 54 81.5
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 1.7e-16 89.0 54 77.8
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.7e-16 89.0 53 83.0
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.7e-16 89.0 46 93.5
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.7e-16 89.0 54 81.5
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 2.3e-16 88.6 54 74.1
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.3e-16 88.6 53 77.4
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.3e-16 88.6 53 77.4
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.3e-16 88.6 53 77.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 2.3e-16 88.6 53 77.4
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.3e-16 88.6 53 75.5
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 3.0e-16 88.2 54 79.6
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 3.9e-16 87.8 53 77.4
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 3.9e-16 87.8 54 79.6
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.9e-16 87.8 54 79.6
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 3.9e-16 87.8 53 77.4
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 3.9e-16 87.8 66 71.2
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 6.6e-16 87.0 46 91.3
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 6.6e-16 87.0 49 85.7
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 6.6e-16 87.0 53 75.5
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 8.6e-16 86.7 53 77.4
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.1e-15 86.3 53 77.4
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.5e-15 85.9 54 75.9
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.9e-15 85.5 53 75.5
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.5e-15 85.1 55 74.5
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.3e-15 84.7 49 81.6
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 4.3e-15 84.3 53 81.1
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.3e-15 84.3 53 71.7
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 7.3e-15 83.6 52 75.0
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 9.5e-15 83.2 49 79.6
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.2e-14 82.8 54 74.1
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.2e-14 82.8 53 73.6
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.6e-14 81.3 48 85.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 4.0e-13 77.8 50 76.0
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 5.2e-13 77.4 60 65.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 5.2e-13 77.4 69 65.2
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.2e-12 76.3 57 59.6
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.5e-12 75.9 54 70.4
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.3e-11 72.8 54 70.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 1.0e-08 63.2 53 52.8
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.5e-07 59.3 53 52.8
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 2.1e-06 55.5 31 83.9


User provided reference genes

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