Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.2e-253 876.7 428 100.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.6e-137 491.5 420 63.3
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.4e-117 426.0 436 55.7
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.9e-108 395.6 446 53.4
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.5e-104 381.3 411 53.0
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 6.3e-39 166.0 175 52.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.8e-28 130.2 191 38.2
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-26 124.8 226 33.6
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.7e-20 104.8 256 27.7
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 7.2e-19 99.4 295 28.5
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-17 95.1 311 24.4
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 8.9e-17 92.4 195 30.3
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-15 87.8 206 26.2
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 8.3e-15 85.9 198 33.8
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.1e-14 85.5 211 30.3
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.1e-14 83.6 121 43.0
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.4e-14 83.2 77 45.5
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.2e-14 82.4 123 35.8
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 7.8e-13 79.3 116 44.8
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.9e-12 77.0 77 42.9
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.9e-12 77.0 77 42.9
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.5e-11 74.3 191 27.7
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 3.3e-11 73.9 185 27.0
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.6e-11 73.2 119 42.9
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 1.6e-10 71.6 238 24.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.1e-10 71.2 180 27.2
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 2.8e-10 70.9 289 24.2
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.8e-10 70.9 101 43.6
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-10 70.5 182 28.0
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 3.6e-10 70.5 179 31.3
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-09 68.6 169 24.3
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 4.0e-09 67.0 259 23.9
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.9e-09 65.9 174 28.2
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.9e-09 65.9 114 35.1
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-08 65.5 190 24.2
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.5e-08 65.1 165 26.1
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.0e-08 64.7 112 32.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.4e-08 63.5 62 51.6
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-08 63.2 119 31.1
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-08 63.2 276 22.1
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 7.5e-08 62.8 116 37.1
Rhsim12G0049400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.5e-08 62.8 109 32.1
vmacro03674 Vaccinium macrocarpon HOM05D002950 ORTHO05D006701 1.3e-07 62.0 110 35.5
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.7e-07 61.6 181 28.2
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.7e-07 60.5 47 61.7
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.4e-07 59.7 178 27.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.4e-07 59.7 323 20.1
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 8.3e-07 59.3 216 27.3
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.3e-07 59.3 182 24.7
Rhsim01G0037700 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-06 58.9 93 35.5
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.4e-06 58.5 259 22.4
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-06 58.2 258 23.6
RhsimUnG0173600 Rhododendron simsii HOM05D008219 ORTHO05D030892 3.2e-06 57.4 105 33.3
Rhsim10G0085300 Rhododendron simsii HOM05D008219 ORTHO05D038150 4.1e-06 57.0 105 33.3
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.4e-06 56.6 166 21.7


User provided reference genes

Program Settings