Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047823 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D033941 1.0e-34 149.4 73 100.0
CSS0024061 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D033941 5.2e-34 147.1 73 98.6
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 4.0e-18 94.4 55 74.5
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 6.8e-18 93.6 56 75.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 2.8e-16 88.2 55 69.1
Dinv36526 Davidia involucrata HOM05D003537 ORTHO05D033941 8.3e-16 86.7 55 72.7
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 5.9e-14 80.5 55 63.6
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.1e-12 76.3 55 61.8
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 4.3e-12 74.3 56 62.5
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 4.7e-11 70.9 55 54.5
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 4.7e-11 70.9 55 54.5
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 9.8e-09 63.2 55 50.9
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 2.2e-08 62.0 52 51.9
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 4.9e-08 60.8 53 52.8
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 6.4e-08 60.5 55 47.3
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 8.3e-08 60.1 55 52.7
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 1.1e-07 59.7 55 49.1
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.4e-07 59.3 55 47.3
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.4e-07 59.3 55 47.3
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 2.4e-07 58.5 55 47.3
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 2.4e-07 58.5 55 45.5
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 2.4e-07 58.5 55 47.3
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 2.4e-07 58.5 55 47.3
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 4.1e-07 57.8 52 50.0
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 5.4e-07 57.4 55 49.1
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-06 56.2 55 47.3
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.0e-06 55.5 54 48.1
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 2.0e-06 55.5 55 41.8
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 3.5e-06 54.7 55 45.5
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 3.5e-06 54.7 52 48.1
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 4.6e-06 54.3 53 50.9
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.6e-06 54.3 55 45.5
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 4.6e-06 54.3 53 43.4
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 6.0e-06 53.9 55 47.3
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 6.0e-06 53.9 51 47.1
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 7.8e-06 53.5 55 41.8
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 7.8e-06 53.5 57 45.6


User provided reference genes

Program Settings