Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047773 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 3.6e-45 184.5 91 100.0
CSS0030810 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 4.5e-27 124.4 92 73.9
CSS0020638 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.5e-22 109.4 67 80.6
CSS0034215 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.5e-22 109.4 67 80.6
CSS0036244 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.5e-22 109.4 67 80.6
CSS0042890 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.5e-22 109.4 67 80.6
CSS0046240 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.4e-20 102.8 67 76.1
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.0e-15 86.7 89 51.7
Rhsim06G0155100 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.9e-14 82.4 83 53.0
CSS0045726 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.2e-13 79.0 58 74.1
CSS0005762 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 5.3e-12 74.3 46 71.7
CSS0016483 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 5.3e-12 74.3 46 71.7
Rhsim02G0039500 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.7e-10 69.3 58 56.9
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 1.1e-09 66.6 70 47.1
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.7e-07 57.4 73 41.1
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.7e-07 57.4 68 41.2
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.5e-06 56.2 91 30.8
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.6e-06 55.5 73 42.5
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-06 55.5 73 42.5
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.4e-06 53.9 65 43.1
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 9.7e-06 53.5 73 42.5


User provided reference genes

Program Settings