Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047727 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 1.4e-119 433.0 221 100.0
CSS0019433 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 7.2e-87 324.3 287 65.5
Actinidia29749 Actinidia chinensis HOM05D004766 ORTHO05D006159 3.8e-72 275.4 264 59.5
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 6.1e-70 268.1 287 54.7
Dinv26060 Davidia involucrata HOM05D004766 ORTHO05D006159 1.0e-64 250.8 287 51.9
Hma1.2p1_2838F.1_g329290 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 1.0e-64 250.8 287 53.0
Hma1.2p1_2838F.1_g329300 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 1.0e-64 250.8 287 53.0
Lj8C56T7 Lonicera japonica HOM05D004766 ORTHO05D006159 1.5e-63 246.9 289 51.6
vmacro09973 Vaccinium macrocarpon HOM05D004766 ORTHO05D006159 4.2e-63 245.4 288 50.7
QL08p064773 Quercus lobata HOM05D004766 ORTHO05D006159 5.5e-63 245.0 287 50.2
Nn2g10346 Nelumbo nucifera HOM05D004766 ORTHO05D006159 2.1e-62 243.0 287 49.1
Rhsim09G0184400 Rhododendron simsii HOM05D004766 ORTHO05D006159 2.1e-62 243.0 288 50.7
GSVIVG01032703001 Vitis vinifera HOM05D004766 ORTHO05D006159 1.4e-61 240.4 287 52.6
CsaV3_6G002240 Cucumis sativus L. HOM05D004766 ORTHO05D006159 3.0e-61 239.2 287 48.8
CAN.G169.5 Capsicum annuum HOM05D004766 ORTHO05D006159 2.0e-60 236.5 287 46.7
MELO3C020001.2 Cucumis melo HOM05D004766 ORTHO05D006159 2.0e-60 236.5 287 48.8
Nn5g26881 Nelumbo nucifera HOM05D004766 ORTHO05D006159 2.0e-60 236.5 282 50.0
ClCG11G005730 Citrullus lanatus HOM05D004766 ORTHO05D006159 2.6e-60 236.1 286 49.0
Prupe.2G263500 Prunus persica HOM05D004766 ORTHO05D006159 3.3e-60 235.7 262 52.7
Oeu054426.2 Olea europaea HOM05D004766 ORTHO05D006159 5.7e-60 235.0 286 48.3
CiPaw.01G306100 Carya illinoinensis HOM05D004766 ORTHO05D006159 1.7e-59 233.4 287 47.7
Cc02_g05520 Coffea canephora HOM05D004766 ORTHO05D006159 4.1e-58 228.8 287 47.4
Nitab4.5_0003695g0010 Nicotiana tabacum HOM05D004766 ORTHO05D006159 1.6e-57 226.9 276 47.1
Duzib128G1614 Durio zibethinus HOM05D004766 ORTHO05D006159 2.7e-57 226.1 285 46.0
Gohir.A13G007600 Gossypium hirsutum HOM05D004766 ORTHO05D006159 7.7e-57 224.6 287 45.3
Lalb_Chr11g0067831 Lupinus albus HOM05D004766 ORTHO05D006159 1.0e-56 224.2 288 47.2
Sed0017451 Sechium edule HOM05D004766 ORTHO05D006159 1.0e-56 224.2 285 47.7
TWI09G0270 Tripterygium wilfordii HOM05D004766 ORTHO05D006159 1.7e-56 223.4 288 47.2
RcHm_v2.0_Chr1g0372121 Rosa chinensis HOM05D004766 ORTHO05D006159 5.0e-56 221.9 287 48.1
Haze_17351 Corylus avellana HOM05D004766 ORTHO05D006159 6.5e-56 221.5 287 47.4
Ciclev10033572m.g Citrus clementina HOM05D004766 ORTHO05D006159 8.5e-56 221.1 287 46.0
Gohir.D13G007700 Gossypium hirsutum HOM05D004766 ORTHO05D006159 8.5e-56 221.1 287 44.6
Nitab4.5_0000109g0520 Nicotiana tabacum HOM05D004766 ORTHO05D006159 8.5e-56 221.1 275 47.3
arahy.Tifrunner.gnm1.ann1.4BS23W Arachis hypogaea HOM05D004766 ORTHO05D006159 1.5e-55 220.3 288 46.5
Cfa001212 Carpinus fangiana HOM05D004766 ORTHO05D006159 1.5e-55 220.3 287 47.0
TAR633G2654 Trochodendron aralioides HOM05D004766 ORTHO05D006159 1.5e-55 220.3 287 47.0
Gorai.013G008100 Gossypium raimondii HOM05D004766 ORTHO05D006159 1.9e-55 219.9 286 44.4
PSO339G1431 Papaver somniferum HOM05D004766 ORTHO05D006159 1.9e-55 219.9 287 46.7
Migut.F01258 Erythranthe guttata HOM05D004766 ORTHO05D006159 3.2e-55 219.2 286 44.4
FvH4_7g25850 Fragaria vesca HOM05D004766 ORTHO05D006159 4.2e-55 218.8 287 48.1
FAN06G4224 Fragaria x ananassa HOM05D004766 ORTHO05D006159 4.2e-55 218.8 287 48.1
MD07G1233000 Malus domestica HOM05D004766 ORTHO05D006159 4.2e-55 218.8 305 44.6
FAN03G3241 Fragaria x ananassa HOM05D004766 ORTHO05D006159 9.4e-55 217.6 287 47.4
PSO384G4442 Papaver somniferum HOM05D004766 ORTHO05D006159 9.4e-55 217.6 287 46.0
FAN10G2197 Fragaria x ananassa HOM05D004766 ORTHO05D006159 1.6e-54 216.9 287 47.4
Ca_16870_v3 Cicer arietinum L. HOM05D004766 ORTHO05D006159 2.7e-54 216.1 287 46.7
Eucgr.J00130 Eucalyptus grandis HOM05D004766 ORTHO05D006159 3.6e-54 215.7 286 47.2
Potri.019G056200 Populus trichocarpa HOM05D004766 ORTHO05D006159 3.6e-54 215.7 286 45.8
ECA233G3027 Erigeron canadensis HOM05D004766 ORTHO05D006159 4.7e-54 215.3 287 45.3
FAN01G2723 Fragaria x ananassa HOM05D004766 ORTHO05D006159 4.7e-54 215.3 287 47.0
Thecc.10G183900 Theobroma cacao HOM05D004766 ORTHO05D006159 4.7e-54 215.3 287 45.3
TPR.G16138 Trifolium pratense HOM05D004766 ORTHO05D006159 4.7e-54 215.3 287 46.3
arahy.Tifrunner.gnm1.ann1.GHXG56 Arachis hypogaea HOM05D004766 ORTHO05D006159 6.1e-54 214.9 288 45.5
Aa31LG10G11180 Aethionema arabicum HOM05D004766 ORTHO05D006159 1.0e-53 214.2 281 44.8
MBI15_g35105_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D006159 1.4e-53 213.8 276 46.0
Atru.chr12.159 Acer truncatum HOM05D004766 ORTHO05D006159 3.0e-53 212.6 288 44.1
MD01G1166300 Malus domestica HOM05D004766 ORTHO05D006159 3.0e-53 212.6 286 45.5
Lalb_Chr08g0239111 Lupinus albus HOM05D004766 ORTHO05D006159 4.0e-53 212.2 288 44.4
MSTRG.178 Avicennia marina HOM05D004766 ORTHO05D006159 5.2e-53 211.8 285 45.3
CANSAT56G1075 Cannabis sativa HOM05D004766 ORTHO05D006159 6.8e-53 211.5 288 44.8
Cpa.g.sc19.83 Carica papaya HOM05D004766 ORTHO05D006159 6.8e-53 211.5 286 46.2
PGSC0003DMG400024309 Solanum tuberosum HOM05D004766 ORTHO05D006159 6.8e-53 211.5 288 44.1
Glyma.04G222000 Glycine max HOM05D004766 ORTHO05D006159 1.2e-52 210.7 287 44.9
DCAR_010519 Daucus carota HOM05D004766 ORTHO05D006159 2.0e-52 209.9 287 44.6
Sc10g0002920 Simmondsia chinensis HOM05D004766 ORTHO05D006159 2.0e-52 209.9 287 43.9
Manes.07G137600 Manihot esculenta HOM05D004766 ORTHO05D006159 2.6e-52 209.5 287 44.6
PGR142G0390 Punica granatum HOM05D004766 ORTHO05D006159 2.6e-52 209.5 287 45.3
Sabra19G0071700 Salix brachista HOM05D004766 ORTHO05D006159 3.4e-52 209.1 287 44.6
AUR62012360 Chenopodium quinoa HOM05D004766 ORTHO05D006159 5.7e-52 208.4 281 44.5
AUR62031489 Chenopodium quinoa HOM05D004766 ORTHO05D006159 1.7e-51 206.8 286 44.1
Glyma.06G143400 Glycine max HOM05D004766 ORTHO05D006159 2.2e-51 206.5 287 44.3
COL.COLO4_19454 Corchorus olitorius HOM05D004766 ORTHO05D006159 4.8e-51 205.3 292 43.8
TAR636G0335 Trochodendron aralioides HOM05D004766 ORTHO05D006159 4.8e-51 205.3 170 64.1
VMungo1309G2839 Vigna mungo HOM05D004766 ORTHO05D006159 1.4e-50 203.8 288 44.4
Phvul.009G142700 Phaseolus vulgaris HOM05D004766 ORTHO05D006159 1.8e-50 203.4 287 42.9
Aqoxy4G02363 Aquilegia oxysepala HOM05D004766 ORTHO05D006159 3.1e-50 202.6 287 43.6
A04p31000 Brassica napus HOM05D004766 ORTHO05D006159 3.1e-50 202.6 263 46.4
BraA04t18557Z Brassica rapa HOM05D000154 ORTHO05D000092 3.1e-50 202.6 263 46.4
Psat5g069120 Pisum sativum HOM05D004766 ORTHO05D006159 3.1e-50 202.6 287 43.9
Lsat_1_v5_gn_8_13521 Lactuca sativa HOM05D004766 ORTHO05D006159 5.4e-50 201.8 274 45.6
EL10Ac2g04254 Beta vulgaris HOM05D004766 ORTHO05D006159 7.0e-50 201.4 287 42.5
C04p68390 Brassica napus HOM05D004766 ORTHO05D006159 7.0e-50 201.4 263 46.4
BolC4t28340H Brassica oleracea HOM05D000154 ORTHO05D000092 7.0e-50 201.4 263 46.4
Medtr3g094070 Medicago truncatula HOM05D004766 ORTHO05D006159 9.1e-50 201.1 287 45.3
Actinidia31615 Actinidia chinensis HOM05D004766 ORTHO05D006159 1.2e-49 200.7 265 49.1
SGA_v2.0_scaffold275G46605 Striga asiatica HOM05D004766 ORTHO05D006159 1.6e-49 200.3 299 42.5
Hund13464 Selenicereus undatus HOM05D004766 ORTHO05D006159 5.9e-49 198.4 286 43.7
Ah.16g104280 Amaranthus hybridus HOM05D004766 ORTHO05D006159 1.0e-48 197.6 287 41.8
THA.LOC104803295 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 1.3e-48 197.2 285 44.2
AL4G38400 Arabidopsis lyrata HOM05D004766 ORTHO05D006159 2.9e-48 196.1 289 43.6
SalBow5G3937 Salvia bowleyana HOM05D004766 ORTHO05D006159 3.8e-48 195.7 323 39.9
Thhalv10016414m.g Eutrema salsugineum HOM05D004766 ORTHO05D006159 5.0e-48 195.3 289 43.3
THA.LOC104812375 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 6.5e-48 194.9 277 43.7
CARHR135660 Cardamine hirsuta HOM05D004766 ORTHO05D006159 8.5e-48 194.5 289 42.6
Carub.0004s2277 Capsella rubella HOM05D004766 ORTHO05D006159 3.2e-47 192.6 289 42.6
BcaC02g07319 Brassica carinata HOM05D004766 ORTHO05D006159 7.2e-47 191.4 289 42.2
AT2G40550 Arabidopsis thaliana HOM05D004766 ORTHO05D006159 1.2e-46 190.7 281 43.4
BcaB06g29150 Brassica carinata HOM05D004766 ORTHO05D006159 1.2e-46 190.7 289 41.9
Sp4g22880 Schrenkiella parvula HOM05D004766 ORTHO05D006159 6.1e-46 188.3 289 41.5
SpUn0061_0030 Schrenkiella parvula HOM05D004766 ORTHO05D006159 6.1e-46 188.3 289 41.5
Actinidia33880 Actinidia chinensis HOM05D004766 ORTHO05D006159 1.4e-45 187.2 233 49.8
ATR0681G084 Amborella trichopoda HOM05D004766 ORTHO05D006159 1.8e-45 186.8 287 38.0
Peaxi162Scf00739g00014 Petunia axillaris HOM05D004766 ORTHO05D006159 2.3e-45 186.4 168 57.7
CDE12G0671 Ceratophyllum demersum HOM05D004766 ORTHO05D006159 3.0e-45 186.0 281 40.2
Dinv21784 Davidia involucrata HOM05D004766 ORTHO05D006159 2.0e-44 183.3 237 47.7
SHI28878 Sapria himalayana HOM05D004766 ORTHO05D006159 7.5e-44 181.4 283 41.3
Sopen06g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-44 181.4 288 41.0
C04p02090 Brassica napus HOM05D004766 ORTHO05D006159 2.8e-43 179.5 291 42.3
Os01g0166800 Oryza sativa ssp. japonica HOM05D004766 ORTHO05D006159 2.4e-42 176.4 283 38.9
Zm00001eb123270 Zea mays HOM05D004766 ORTHO05D006159 4.5e-41 172.2 282 38.7
Lj1g0018162 Lotus japonicus HOM05D004766 ORTHO05D006159 7.7e-41 171.4 290 39.0
HPP92_018094 Vanilla planifolia HOM05D004766 ORTHO05D006159 7.7e-41 171.4 271 39.9
unitig_90.g27573 Utricularia gibba HOM05D004766 ORTHO05D006159 3.6e-38 162.5 287 36.6
SEGI_19414 Sequoiadendron giganteum HOM05D004766 ORTHO05D006159 1.5e-36 157.1 280 36.8
Solyc06g050200.2 Solanum lycopersicum HOM05D004766 ORTHO05D006159 9.8e-36 154.5 170 49.4
BcaC02g12723 Brassica carinata HOM05D000154 ORTHO05D000092 1.7e-32 143.7 227 42.3
Pp3c21_8640 Physcomitrium patens HOM05D004766 ORTHO05D006159 2.2e-27 126.7 279 34.4
BolC4t21857H Brassica oleracea HOM05D000154 ORTHO05D000092 8.3e-27 124.8 199 42.2
HanXRQChr17g0560771 Helianthus annuus HOM05D004766 ORTHO05D006159 2.7e-25 119.8 187 38.0
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis HOM05D004766 ORTHO05D006159 1.0e-24 117.9 280 32.1
HanXRQChr08g0222571 Helianthus annuus HOM05D004766 ORTHO05D006159 3.0e-24 116.3 187 38.5
SMO347G0133 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 1.1e-23 114.4 268 31.3
MD01G1183300 Malus domestica HOM05D004766 ORTHO05D006159 2.1e-22 110.2 165 44.2
SalBow5G1700 Salvia bowleyana HOM05D004766 ORTHO05D006159 2.1e-22 110.2 153 44.4
CBR_g29836 Chara braunii HOM05D004766 ORTHO05D006159 4.9e-19 99.0 324 29.3
BcaC02g12598 Brassica carinata HOM05D004766 ORTHO05D006159 2.4e-18 96.7 75 64.0
MBI11_g31297_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D000022 5.4e-18 95.5 68 66.2
BolC4t21721H Brassica oleracea HOM05D004766 ORTHO05D006159 1.2e-17 94.4 75 62.7
SMO347G0333 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 3.0e-16 89.7 269 29.7
Mapoly0030s0020 Marchantia polymorpha HOM05D004766 ORTHO05D006159 5.1e-16 89.0 297 25.3
MCO09G187 Micromonas commoda HOM05D004766 ORTHO05D006159 3.4e-12 76.3 239 27.2
TAR636G1150 Trochodendron aralioides HOM05D004766 ORTHO05D006159 1.1e-10 71.2 57 61.4
Nn1g07504 Nelumbo nucifera HOM05D004766 ORTHO05D006159 3.2e-10 69.7 45 73.3
Peaxi162Scf00739g00019 Petunia axillaris HOM05D004766 ORTHO05D006159 1.6e-09 67.4 53 58.5
Solyc06g050180.3 Solanum lycopersicum HOM05D004766 ORTHO05D006159 6.2e-06 55.5 55 52.7


User provided reference genes

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