Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 3.5e-103 378.3 187 100.0
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 1.5e-64 250.0 196 67.9
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 1.6e-63 246.5 208 63.9
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 9.1e-59 230.7 193 63.7
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 7.7e-58 227.6 197 59.9
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.7e-57 226.5 195 59.0
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 5.0e-57 224.9 199 57.8
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 1.5e-56 223.4 199 56.8
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 2.5e-56 222.6 242 55.8
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 6.1e-55 218.0 198 58.6
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 8.0e-55 217.6 197 56.9
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.4e-54 216.9 207 55.6
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 6.3e-52 208.0 187 61.0
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 5.4e-51 204.9 171 66.1
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 2.0e-50 203.0 189 55.0
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 2.0e-50 203.0 158 67.7
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 4.5e-50 201.8 183 60.7
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 5.9e-50 201.4 170 64.1
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 1.7e-49 199.9 191 57.6
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 6.5e-49 198.0 184 59.2
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 1.5e-48 196.8 157 63.7
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 4.2e-48 195.3 197 56.9
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 5.5e-48 194.9 174 57.5
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 6.1e-47 191.4 171 62.6
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 1.0e-46 190.7 165 61.2
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 1.4e-46 190.3 204 54.9
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 1.8e-46 189.9 196 53.6
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 4.0e-46 188.7 227 49.8
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 6.8e-46 188.0 222 51.8
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 6.8e-46 188.0 187 56.1
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 1.2e-45 187.2 192 54.7
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 2.0e-45 186.4 171 59.6
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 3.4e-45 185.7 217 50.2
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 3.4e-45 185.7 161 62.1
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 5.7e-45 184.9 217 50.7
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 7.5e-45 184.5 177 55.9
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.7e-44 183.3 217 50.2
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 2.2e-44 183.0 158 62.7
Oeu001369.2 Olea europaea HOM05D007521 ORTHO05D009387 2.2e-44 183.0 159 58.5
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 4.9e-44 181.8 166 59.6
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 6.3e-44 181.4 166 56.0
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 1.1e-43 180.6 177 57.6
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 1.4e-43 180.3 171 57.9
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 1.4e-43 180.3 172 59.9
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 7.0e-43 177.9 165 56.4
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 9.1e-43 177.6 168 58.9
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 1.2e-42 177.2 169 58.6
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 1.6e-42 176.8 192 53.1
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 1.6e-42 176.8 179 55.9
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 4.5e-42 175.3 158 57.6
Sopen05g030700 Solanum pennellii HOM05D007521 ORTHO05D009387 1.3e-41 173.7 158 57.0
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 2.9e-41 172.6 181 56.9
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 3.8e-41 172.2 153 59.5
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 5.0e-41 171.8 174 55.2
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 8.6e-41 171.0 174 55.7
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 1.9e-40 169.9 169 57.4
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 1.9e-40 169.9 155 59.4
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 9.5e-40 167.5 176 52.3
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 1.2e-39 167.2 166 57.2
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 1.2e-39 167.2 167 56.3
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 2.1e-39 166.4 151 62.3
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 8.0e-39 164.5 163 55.8
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 1.0e-38 164.1 160 56.9
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 6.8e-38 161.4 155 53.5
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 2.6e-37 159.5 186 52.2
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 1.3e-36 157.1 165 55.2
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 3.7e-36 155.6 161 54.7
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 4.9e-36 155.2 164 53.7
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 6.4e-36 154.8 172 50.0
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 6.4e-36 154.8 172 50.0
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 1.1e-35 154.1 164 53.0
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 4.1e-35 152.1 159 56.0
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 9.2e-35 151.0 174 50.6
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 1.0e-33 147.5 175 49.1
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 1.5e-32 143.7 186 46.8
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.5e-32 143.7 187 47.1
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 1.9e-32 143.3 189 45.0
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 2.1e-31 139.8 183 47.0
Cfa001178 Carpinus fangiana HOM05D007521 ORTHO05D009387 3.1e-30 136.0 136 56.6
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 7.5e-29 131.3 177 46.3
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 1.7e-28 130.2 118 57.6
Hund13426 Selenicereus undatus HOM05D007521 ORTHO05D009387 2.0e-26 123.2 213 39.4
Manes.10G004400 Manihot esculenta HOM05D007521 ORTHO05D009387 2.7e-26 122.9 161 49.7
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 4.6e-26 122.1 157 46.5
COL.COLO4_19497 Corchorus olitorius HOM05D007521 ORTHO05D009387 7.8e-26 121.3 134 50.7
Hma1.2p1_0264F.1_g105790 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.3e-24 115.9 106 57.5
AT4G19985 Arabidopsis thaliana HOM05D007521 ORTHO05D009387 2.0e-21 106.7 138 47.8
Actinidia01020 Actinidia chinensis HOM05D007521 ORTHO05D009387 3.4e-21 105.9 88 61.4
Hma1.2p1_0264F.1_g105780 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 5.8e-21 105.1 104 53.8
Actinidia07775 Actinidia chinensis HOM05D007521 ORTHO05D009387 8.3e-20 101.3 150 45.3
Thhalv10026093m.g Eutrema salsugineum HOM05D007521 ORTHO05D009387 1.9e-19 100.1 134 45.5
SEGI_30344 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 4.1e-19 99.0 164 37.8
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 3.0e-17 92.8 161 34.8
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 4.7e-15 85.5 153 35.3
Pp3c3_11210 Physcomitrium patens HOM05D007521 ORTHO05D009387 4.9e-12 75.5 150 34.0
CDE04G1691 Ceratophyllum demersum HOM05D000172 ORTHO05D000273 6.0e-10 68.6 75 50.7
Cre10.g464264 Chlamydomonas reinhardtii HOM05D007521 ORTHO05D009387 5.6e-08 62.0 62 46.8
Os05g0516300 Oryza sativa ssp. japonica HOM05D007521 ORTHO05D009387 4.7e-07 58.9 115 37.4
Ah.12g064700 Amaranthus hybridus HOM05D007521 ORTHO05D009387 8.1e-07 58.2 39 69.2
Sc08g0005600 Simmondsia chinensis HOM05D003003 ORTHO05D009423 8.1e-07 58.2 131 30.5
SMO356G0638 Selaginella moellendorffii HOM05D007521 ORTHO05D009387 8.9e-06 54.7 119 31.9


User provided reference genes

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