Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.1e-105 386.7 211 100.0
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 4.1e-84 315.1 212 84.4
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 9.2e-84 313.9 212 83.0
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 4.6e-83 311.6 220 79.5
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.1e-79 300.4 212 78.8
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 9.9e-78 293.9 208 77.4
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 3.5e-75 285.4 211 74.9
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 3.5e-75 285.4 211 76.8
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 4.6e-75 285.0 211 75.4
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.1e-73 280.4 211 73.9
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.1e-73 280.4 209 74.2
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 9.6e-73 277.3 212 74.5
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 9.0e-71 270.8 209 73.2
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.2e-70 270.4 213 71.4
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 2.6e-70 269.2 212 73.1
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.9e-69 265.8 212 71.7
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 4.9e-69 265.0 210 69.5
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 6.4e-69 264.6 213 70.9
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 1.1e-68 263.8 215 69.3
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.1e-68 263.8 212 70.3
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.9e-68 263.1 211 70.1
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.9e-68 263.1 212 71.7
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 5.4e-68 261.5 222 68.0
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 9.3e-68 260.8 212 71.2
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 2.7e-67 259.2 207 70.5
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.9e-67 257.7 212 68.4
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 3.0e-66 255.8 215 68.4
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.1e-65 253.8 214 68.7
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 3.3e-65 252.3 224 65.2
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 5.6e-65 251.5 255 61.6
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 9.6e-65 250.8 211 70.1
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 2.1e-64 249.6 215 66.0
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 6.2e-64 248.1 213 67.1
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 8.1e-64 247.7 211 68.2
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.1e-63 247.3 214 67.3
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 1.1e-63 247.3 210 66.7
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 1.4e-63 246.9 211 67.3
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 1.8e-63 246.5 217 65.9
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 4.0e-63 245.4 213 67.1
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 9.0e-63 244.2 169 76.3
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 1.2e-62 243.8 213 65.7
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.5e-62 243.4 212 65.1
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.5e-62 243.4 211 65.9
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 1.5e-62 243.4 206 67.0
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 4.5e-62 241.9 211 65.9
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 9.9e-62 240.7 213 62.9
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.3e-61 240.4 169 75.1
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.3e-61 240.4 210 63.3
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 2.2e-61 239.6 210 63.3
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 2.9e-61 239.2 215 64.2
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 2.4e-60 236.1 216 61.6
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 3.2e-60 235.7 210 62.9
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 4.2e-60 235.3 177 70.6
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 9.3e-60 234.2 214 65.0
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 1.6e-59 233.4 212 64.2
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 4.6e-59 231.9 217 60.8
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.3e-58 230.3 213 61.0
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.3e-58 230.3 213 64.3
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 1.3e-58 230.3 209 63.2
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 5.1e-58 228.4 211 60.2
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 5.1e-58 228.4 191 67.0
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 6.7e-58 228.0 226 60.2
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 6.7e-58 228.0 155 85.2
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 8.7e-58 227.6 206 63.6
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 2.5e-57 226.1 211 60.2
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 5.6e-57 224.9 211 64.0
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 7.4e-57 224.6 213 62.4
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.6e-56 223.4 219 61.6
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.6e-56 223.4 233 57.1
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 3.7e-56 222.2 212 59.4
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 1.8e-55 219.9 174 69.5
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 1.3e-53 213.8 201 59.2
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 2.2e-53 213.0 170 70.0
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 3.2e-52 209.1 211 60.7
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 6.0e-51 204.9 145 75.9
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.8e-50 203.4 212 56.1
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.6e-48 196.8 211 57.3
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-47 193.7 203 55.2
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 2.4e-47 193.0 211 54.0
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 2.4e-47 193.0 212 58.5
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 6.9e-47 191.4 186 58.1
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.2e-46 190.7 168 66.1
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 4.5e-46 188.7 146 69.9
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 7.6e-46 188.0 216 54.6
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.3e-45 187.2 216 52.3
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.7e-45 186.8 196 54.1
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 1.1e-44 184.1 216 52.8
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-44 183.7 151 66.2
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.1e-44 181.4 156 67.3
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 1.2e-43 180.6 216 56.9
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 1.6e-43 180.3 206 49.5
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 2.1e-43 179.9 151 65.6
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 7.9e-43 177.9 158 63.9
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.0e-42 177.6 148 66.2
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.8e-42 176.8 168 57.7
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.9e-42 175.6 146 66.4
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 2.5e-41 172.9 155 64.5
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 3.3e-41 172.6 214 55.6
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 1.1e-39 167.5 208 44.7
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 2.9e-37 159.5 211 50.7
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 1.1e-36 157.5 175 54.3
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 4.2e-36 155.6 166 58.4
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 3.0e-34 149.4 214 50.5
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 3.4e-30 136.0 213 46.9
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 6.5e-29 131.7 169 50.9
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.6e-27 127.1 184 45.7
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.4e-26 124.0 131 57.3
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.4e-26 124.0 198 36.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.5e-22 110.5 201 42.3
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 4.2e-20 102.4 101 57.4
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 6.1e-19 98.6 153 37.9
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.0e-19 98.2 147 41.5
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.8e-16 89.0 88 62.5
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 6.3e-16 88.6 105 54.3
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 7.0e-15 85.1 95 52.6
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 9.1e-15 84.7 68 66.2
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 7.7e-14 81.6 177 37.9
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.2e-13 80.1 177 37.9
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.9e-12 77.0 65 61.5
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.2e-12 76.3 77 62.3
Eucgr.B00904 Eucalyptus grandis HOM05D006133 ORTHO05D007855 1.4e-10 70.9 183 33.3
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 1.5e-09 67.4 79 53.2
Eucgr.B00952 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.2e-08 63.5 98 41.8
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 6.3e-08 62.0 42 73.8
TAR636G0634 Trochodendron aralioides HOM05D006133 ORTHO05D007855 7.0e-07 58.5 135 36.3
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.6e-06 57.4 54 57.4


User provided reference genes

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