Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.1e-151 540.0 284 100.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.6e-147 526.2 284 96.8
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 6.5e-125 451.1 284 83.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.7e-123 444.9 284 80.3
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.0e-122 442.2 284 79.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.4e-113 411.8 342 67.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.8e-112 409.1 275 76.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.8e-111 406.4 278 77.3
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.4e-111 406.0 278 75.2
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.1e-111 405.6 273 76.6
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 3.1e-111 405.6 267 76.8
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 9.1e-111 404.1 275 75.3
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.6e-110 403.3 266 76.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.6e-110 403.3 269 76.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 3.5e-110 402.1 276 75.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.3e-109 400.2 275 75.3
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.3e-109 400.2 273 76.6
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 3.8e-109 398.7 275 75.3
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 8.5e-109 397.5 280 71.8
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.1e-108 397.1 276 74.3
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.1e-108 397.1 269 74.7
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.1e-108 397.1 277 74.4
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.1e-108 397.1 270 74.8
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.5e-108 396.7 281 74.0
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.9e-108 396.4 279 72.0
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.9e-108 396.4 279 72.0
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.9e-108 396.4 282 73.4
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.2e-108 395.6 275 74.9
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.2e-108 395.2 275 73.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.2e-108 395.2 278 73.0
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 4.2e-108 395.2 277 74.4
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 7.2e-108 394.4 240 85.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.2e-108 394.4 269 74.3
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 6.1e-107 391.3 270 73.0
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 2.3e-106 389.4 279 71.0
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 3.0e-106 389.0 276 72.8
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.0e-106 388.7 273 73.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 4.0e-106 388.7 278 70.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.2e-105 387.1 271 70.5
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.2e-105 387.1 268 72.4
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.0e-105 386.3 279 72.4
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 1.7e-104 383.3 268 73.5
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 2.2e-104 382.9 280 69.3
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 4.9e-104 381.7 268 75.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 1.1e-103 380.6 286 71.7
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.4e-103 380.2 273 71.8
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.8e-103 379.8 269 70.3
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.1e-103 378.6 273 71.4
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 5.4e-103 378.3 269 70.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 7.0e-103 377.9 241 82.2
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 9.1e-103 377.5 277 70.0
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.2e-102 377.1 272 70.2
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.5e-102 375.6 264 70.5
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.9e-102 374.8 273 70.7
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.3e-101 373.6 272 69.1
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.7e-101 373.2 276 67.8
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.9e-101 372.5 272 68.8
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.5e-100 370.2 272 68.8
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.5e-100 370.2 272 68.8
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.5e-100 370.2 278 69.4
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.9e-100 369.8 276 66.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.9e-100 369.8 276 66.3
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.5e-100 369.4 280 68.2
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 7.2e-100 367.9 278 68.3
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 2.1e-99 366.3 281 68.7
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 2.8e-99 365.9 263 70.0
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 3.6e-99 365.5 279 69.2
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 4.7e-99 365.2 281 67.6
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 5.2e-98 361.7 280 70.4
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 6.8e-98 361.3 272 69.1
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.5e-97 360.1 286 66.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 2.6e-97 359.4 286 66.1
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 3.4e-97 359.0 284 66.9
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.4e-95 353.6 281 65.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.8e-95 353.2 285 66.3
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 4.1e-95 352.1 268 68.7
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 7.0e-95 351.3 273 67.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 9.2e-95 350.9 275 67.3
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.2e-94 350.5 270 67.4
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.6e-94 350.1 276 65.2
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 3.5e-94 349.0 276 65.9
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.7e-93 346.7 225 79.6
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.5e-92 343.6 234 74.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.9e-92 343.2 264 67.0
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 9.5e-92 340.9 290 64.1
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.6e-91 340.1 284 64.4
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 4.7e-91 338.6 277 64.6
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 8.0e-91 337.8 280 63.6
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.9e-90 334.3 264 67.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.5e-89 333.6 264 66.3
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.4e-87 326.2 237 71.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.1e-87 325.5 274 62.4
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 2.7e-86 322.8 268 61.6
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.6e-86 322.0 224 73.7
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 7.8e-86 321.2 237 70.9
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.7e-85 320.1 274 58.4
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 4.0e-82 308.9 271 57.6
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 5.2e-82 308.5 259 59.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.7e-80 303.5 390 46.4
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.9e-80 302.8 232 66.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.4e-80 301.6 267 61.0
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.5e-68 263.8 243 60.1
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.2e-67 260.8 268 54.1
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 6.8e-66 255.0 254 55.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.9e-60 236.9 149 83.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-58 231.1 153 73.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 5.1e-53 212.2 196 60.7
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.8e-51 206.5 183 64.5
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.2e-49 201.1 220 51.8
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 7.6e-49 198.4 161 64.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 7.4e-44 181.8 215 47.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.3e-42 175.6 140 59.3
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.9e-40 169.1 120 73.3
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.4e-39 167.5 135 67.4
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-33 147.9 118 68.6
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 9.3e-31 138.3 217 45.6
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.7e-30 136.7 136 58.1
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 6.7e-29 132.1 133 60.9
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.2e-23 113.2 77 74.0
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.0e-21 106.7 80 70.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.8e-19 99.4 246 30.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.3e-11 74.7 108 41.7
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 3.1e-10 70.1 46 65.2


User provided reference genes

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