Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047684 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D033872 5.6e-62 240.7 119 100.0
CSS0050107 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D033872 2.4e-44 182.2 140 71.4
CSS0013519 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.2e-17 90.9 106 50.9
Rhsim03G0061000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-16 89.4 111 48.6
Actinidia07747 Actinidia chinensis HOM05D000107 ORTHO05D000062 3.6e-16 88.6 122 44.3
CSS0003957 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-16 88.2 106 50.0
CSS0007220 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-16 88.2 106 50.0
CSS0009121 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-16 88.2 106 50.0
CSS0012009 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-16 88.2 106 51.9
CSS0048865 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-16 88.2 106 50.0
CSS0049745 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.1e-16 87.8 106 49.1
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 6.1e-16 87.8 119 47.1
CSS0022398 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.4e-15 86.7 106 50.0
CSS0050072 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.1e-15 84.7 106 49.1
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.7e-14 80.5 122 43.4
CSS0020194 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-13 80.1 106 47.2
Rhsim09G0073600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-13 80.1 103 45.6
Rhsim11G0003200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-12 76.6 124 41.9
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-12 75.5 110 43.6
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-12 75.5 110 43.6
Rhsim07G0152200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-11 73.6 124 43.5
Rhsim01G0051300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-11 72.4 94 46.8
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-11 71.2 74 51.4
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.8e-10 68.6 91 46.2
Actinidia02455 Actinidia chinensis HOM05D000263 ORTHO05D000062 1.4e-09 66.6 117 39.3
RhsimUnG0041600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-09 65.5 88 45.5
Hma1.2p1_1173F.1_g263710 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 1.2e-08 63.5 79 41.8
CSS0045611 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.7e-08 61.6 134 31.3
Rhsim08G0138300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-07 58.9 109 33.9
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 1.1e-06 57.0 83 43.4
Rhsim01G0155300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.0 108 39.8
Rhsim09G0060300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-06 56.2 80 35.0
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 80 35.0
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 80 35.0
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 80 35.0
Rhsim11G0005900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 86 40.7
CSS0020545 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 9.7e-06 53.9 122 27.9
Rhsim10G0213900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.7e-06 53.9 79 34.2


User provided reference genes

Program Settings