Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.7e-177 624.8 319 100.0
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.8e-171 605.9 320 97.2
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 1.1e-136 490.3 318 79.9
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 7.3e-125 451.1 321 74.1
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 8.9e-123 444.1 318 69.2
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.6e-119 433.3 318 67.9
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 3.5e-119 432.2 318 67.6
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 4.6e-119 431.8 318 71.1
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 7.8e-119 431.0 317 71.0
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 3.0e-118 429.1 324 71.3
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 8.7e-118 427.6 299 75.9
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 2.1e-116 422.9 320 70.0
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 4.8e-116 421.8 320 70.3
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 1.4e-115 420.2 320 69.4
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 1.4e-115 420.2 318 69.2
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 2.6e-114 416.0 318 69.2
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.4e-114 415.2 321 68.5
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 4.4e-114 415.2 326 66.9
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 5.8e-114 414.8 333 64.9
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 7.6e-114 414.5 323 66.6
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 4.9e-113 411.8 320 67.8
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 6.4e-113 411.4 318 69.2
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 6.4e-113 411.4 320 69.1
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 1.4e-112 410.2 359 62.4
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 3.2e-112 409.1 321 70.4
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 4.2e-112 408.7 321 68.2
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 7.1e-112 407.9 320 68.4
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 7.1e-112 407.9 320 68.8
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 7.1e-112 407.9 315 67.9
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 9.3e-112 407.5 321 67.9
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.2e-111 407.1 320 68.8
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 2.1e-111 406.4 320 66.9
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 3.5e-111 405.6 320 68.8
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 3.5e-111 405.6 319 67.4
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 6.0e-111 404.8 320 68.4
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 7.9e-111 404.4 321 66.7
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 7.9e-111 404.4 320 68.1
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 1.0e-110 404.1 311 69.1
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.0e-110 404.1 330 63.6
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 5.1e-110 401.7 316 67.4
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 5.1e-110 401.7 322 66.8
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 5.1e-110 401.7 318 67.9
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 5.1e-110 401.7 320 67.8
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 1.9e-109 399.8 314 65.6
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.9e-109 399.8 335 65.4
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 5.6e-109 398.3 317 66.6
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 9.6e-109 397.5 320 65.0
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 1.6e-108 396.7 316 65.5
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 8.1e-108 394.4 327 63.9
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 1.1e-107 394.0 320 64.7
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 2.4e-107 392.9 325 65.5
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 4.0e-107 392.1 307 68.1
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 4.0e-107 392.1 323 66.6
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 4.5e-106 388.7 318 66.4
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 1.3e-105 387.1 314 65.3
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 1.7e-105 386.7 314 64.6
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 2.9e-105 386.0 314 64.6
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 2.9e-105 386.0 312 65.7
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 6.4e-105 384.8 373 59.2
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 6.4e-105 384.8 316 65.2
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 8.4e-105 384.4 320 65.3
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 1.1e-104 384.0 317 64.7
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.1e-104 384.0 317 64.7
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 5.4e-104 381.7 344 62.2
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 5.4e-104 381.7 314 63.4
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 7.1e-104 381.3 318 63.5
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 1.2e-103 380.6 319 64.6
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 6.0e-103 378.3 321 62.9
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 1.8e-102 376.7 317 62.8
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 3.3e-101 372.5 322 61.8
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 9.6e-101 370.9 254 73.6
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 2.8e-100 369.4 377 55.7
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 3.7e-100 369.0 321 61.4
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 1.1e-99 367.5 325 60.9
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.1e-99 367.5 367 56.4
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 2.6e-98 362.8 316 61.7
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.0e-97 360.9 325 60.9
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 3.8e-97 359.0 342 58.2
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 6.5e-97 358.2 315 60.3
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 1.1e-96 357.5 317 60.9
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 1.1e-96 357.5 316 60.1
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 2.5e-96 356.3 298 64.1
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 2.5e-96 356.3 318 60.4
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 2.5e-96 356.3 318 59.7
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.1e-95 353.2 311 62.7
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 4.6e-95 352.1 317 60.9
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 1.3e-94 350.5 311 60.1
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 3.9e-94 349.0 317 60.9
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 6.7e-94 348.2 316 59.8
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 8.7e-94 347.8 317 60.6
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 1.1e-93 347.4 316 59.5
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 1.5e-93 347.1 316 59.2
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 1.9e-93 346.7 316 58.9
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 1.9e-93 346.7 316 58.9
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 1.9e-93 346.7 316 58.9
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 2.8e-92 342.8 326 58.6
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 2.8e-92 342.8 326 58.6
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 6.2e-92 341.7 317 57.7
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 1.1e-91 340.9 320 57.8
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 2.0e-90 336.7 319 57.1
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 7.6e-90 334.7 306 59.8
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 1.3e-89 334.0 313 56.2
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 3.2e-88 329.3 266 65.4
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 7.9e-87 324.7 310 56.8
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 8.2e-84 314.7 310 55.5
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 3.1e-83 312.8 264 63.3
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 3.8e-81 305.8 206 76.7
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.2e-80 302.8 312 55.8
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 5.5e-80 302.0 301 57.8
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.1e-75 287.7 353 51.3
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 1.8e-75 287.0 301 54.8
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 7.9e-71 271.6 325 52.3
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.7e-68 263.8 320 51.2
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 5.2e-62 242.3 273 50.9
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 7.5e-61 238.4 313 44.1
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 9.7e-61 238.0 309 44.3
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 5.0e-57 225.7 320 42.8
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 7.2e-56 221.9 176 69.3
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 3.0e-46 189.9 202 48.5
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 4.9e-44 182.6 110 84.5
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.3e-40 168.7 264 42.0
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 6.1e-39 165.6 105 77.1
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 2.0e-37 160.6 179 45.3
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 4.9e-36 156.0 110 72.7
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 8.6e-33 145.2 196 46.4
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.9e-32 144.1 136 60.3
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 9.2e-27 125.2 100 65.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 2.5e-24 117.1 232 36.2
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 2.9e-20 103.6 109 52.3
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 1.3e-17 94.7 337 30.0
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 8.6e-17 92.0 96 55.2
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 9.5e-16 88.6 99 54.5
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 4.4e-13 79.7 67 62.7
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 4.4e-13 79.7 49 83.7
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 7.6e-13 79.0 45 88.9
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 3.7e-12 76.6 82 53.7
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 6.4e-12 75.9 54 68.5
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 6.0e-10 69.3 53 58.5
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.0e-09 68.6 121 38.0
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 5.6e-08 62.8 50 52.0
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 1.2e-07 61.6 51 68.6
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.4e-06 58.2 122 34.4
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 2.4e-06 57.4 36 69.4


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