Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-52 208.4 97 100.0
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.2e-42 174.1 97 84.5
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.4e-39 164.1 92 81.5
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-38 162.9 97 79.4
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.6e-38 161.0 92 80.4
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.6e-38 161.0 94 80.9
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.0e-38 160.6 92 79.3
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.0e-37 158.3 97 79.4
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-35 150.6 101 73.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-35 150.6 101 73.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-35 150.6 101 73.3
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-34 149.4 101 72.3
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.8e-34 149.1 92 78.3
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.5e-33 144.4 96 71.9
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.6e-33 143.7 96 70.8
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.9e-33 143.3 96 70.8
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-32 141.4 96 69.8
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.9e-31 139.0 96 69.8
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-30 136.3 96 66.7
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-28 129.4 96 64.6
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 6.9e-26 120.6 96 59.4
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 3.4e-25 118.2 96 59.4
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 9.9e-25 116.7 96 58.3
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 1.7e-24 115.9 96 57.3
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 3.8e-24 114.8 96 57.3
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 8.4e-24 113.6 96 56.2
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.1e-23 110.5 83 59.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-22 109.0 96 53.1
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.5e-22 108.2 96 51.0
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.6e-22 107.8 100 54.0
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.8e-21 105.9 74 71.6
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.1e-21 104.4 96 51.0
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-20 103.2 116 48.3
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.9e-20 102.4 96 50.0
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.5e-20 102.1 96 53.1
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-19 98.6 74 66.2
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.2e-19 97.1 96 47.9
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.3e-18 94.4 94 51.1
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 5.3e-18 94.4 85 52.9
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.4e-17 91.7 78 55.1
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.5e-15 84.3 60 60.0
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-14 82.8 79 48.1
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 1.3e-13 79.7 61 62.3
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-13 79.7 96 43.8
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-13 79.7 96 43.8
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-13 79.3 55 63.6
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-13 79.3 96 43.8
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.0e-13 78.6 54 64.8
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 3.9e-13 78.2 96 42.7
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-12 76.6 118 38.1
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-12 75.1 55 60.0
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 3.3e-12 75.1 102 41.2
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 7.4e-12 73.9 101 38.6
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 7.4e-12 73.9 102 39.2
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 9.7e-12 73.6 102 39.2
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 9.7e-12 73.6 102 39.2
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-11 73.2 101 37.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-11 72.8 102 41.2
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 3.7e-11 71.6 53 60.4
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-11 71.6 102 40.2
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-11 71.6 102 39.2
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.3e-11 70.9 50 60.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 8.2e-11 70.5 101 38.6
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-10 69.7 45 68.9
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-10 69.3 101 35.6
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-10 69.3 83 43.4
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.1e-10 68.6 48 62.5
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-10 68.6 96 35.4
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 4.1e-10 68.2 36 83.3
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-10 68.2 79 44.3
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 6.9e-10 67.4 96 35.4
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 9.0e-10 67.0 96 35.4
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 9.0e-10 67.0 96 35.4
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-10 67.0 96 35.4
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-09 66.2 86 39.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-09 66.2 43 74.4
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 2.0e-09 65.9 96 34.4
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 4.5e-09 64.7 96 34.4
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.0e-08 63.5 65 50.8
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.7e-08 62.8 96 34.4
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 1.7e-08 62.8 96 34.4
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.5e-08 60.8 48 56.2
CSS0037544 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.3 42 71.4
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.2e-07 58.2 70 44.3
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 9.3e-07 57.0 64 39.1
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 1.6e-06 56.2 51 52.9
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 2.1e-06 55.8 41 58.5


User provided reference genes

Program Settings