Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 2.3e-301 1038.1 523 100.0
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 9.0e-290 999.6 533 95.5
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 6.6e-208 727.6 531 71.6
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.3e-195 686.8 524 69.5
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.3e-195 686.8 522 66.5
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 6.4e-195 684.5 520 69.0
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 1.9e-194 682.9 523 68.3
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 2.7e-193 679.1 522 67.8
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 1.0e-192 677.2 524 67.9
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 3.9e-192 675.2 530 68.5
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.6e-190 669.8 527 65.7
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 5.3e-189 664.8 520 67.1
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 7.6e-188 661.0 545 62.8
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.0e-187 660.6 526 66.3
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.3e-187 660.2 397 81.4
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.1e-186 657.1 441 76.4
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 4.2e-186 655.2 442 74.4
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 9.3e-186 654.1 527 64.9
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 3.5e-185 652.1 500 69.4
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 4.6e-185 651.7 482 68.5
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 4.6e-185 651.7 438 73.7
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.3e-184 650.2 547 62.5
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 1.9e-183 646.4 495 66.5
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.2e-182 642.9 440 72.7
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 6.3e-182 641.3 527 63.2
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 8.2e-182 641.0 445 71.2
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 1.8e-181 639.8 565 61.2
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 6.9e-181 637.9 456 70.6
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 6.9e-181 637.9 524 63.9
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 6.9e-181 637.9 429 74.4
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 2.6e-180 636.0 497 66.8
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.4e-180 635.6 420 76.9
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 3.4e-180 635.6 470 67.2
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 4.5e-180 635.2 487 66.7
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 7.6e-180 634.4 529 64.8
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.2e-179 632.9 565 60.9
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.2e-179 632.9 524 62.8
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 3.8e-179 632.1 495 65.5
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 5.0e-179 631.7 525 64.0
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 1.1e-178 630.6 518 63.5
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 1.4e-178 630.2 536 63.4
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.4e-178 630.2 460 68.9
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.4e-178 630.2 390 78.5
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.9e-178 629.8 460 69.6
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.9e-178 629.8 460 69.6
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 2.5e-178 629.4 460 69.6
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.5e-178 628.2 460 69.3
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 9.3e-178 627.5 524 62.8
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 2.1e-177 626.3 526 62.7
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.7e-177 625.9 460 69.1
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 2.7e-177 625.9 518 63.3
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 6.1e-177 624.8 485 66.0
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.3e-176 623.6 497 64.8
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 3.0e-176 622.5 483 66.5
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.9e-175 619.8 520 64.2
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.3e-175 619.0 482 66.6
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 7.4e-175 617.8 525 63.2
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 9.7e-175 617.5 522 63.6
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.3e-174 617.1 525 63.6
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 1.1e-173 614.0 458 69.0
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.4e-173 612.8 449 69.3
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.2e-172 610.5 524 62.6
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.5e-172 610.1 527 61.9
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.9e-172 608.2 509 62.9
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 5.0e-171 605.1 469 66.1
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 1.1e-170 604.0 463 68.0
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.4e-170 603.6 448 69.4
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 2.5e-170 602.8 497 62.8
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.8e-168 596.7 450 68.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 2.3e-168 596.3 447 66.9
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 2.8e-166 589.3 490 63.1
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.1e-165 587.4 527 61.1
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 1.2e-164 583.9 458 64.8
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.6e-164 582.8 373 75.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 3.4e-164 582.4 462 65.8
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 4.5e-164 582.0 446 66.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 3.8e-163 578.9 528 59.8
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 5.0e-163 578.6 466 64.8
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 6.5e-163 578.2 446 66.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 6.5e-163 578.2 446 66.1
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 8.5e-163 577.8 458 64.4
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 1.4e-162 577.0 452 64.4
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 9.4e-162 574.3 560 56.1
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 4.8e-158 562.0 444 64.0
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.1e-157 560.8 478 63.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 5.9e-156 555.1 473 61.5
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.1e-153 545.0 404 68.1
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.0e-152 544.3 445 63.4
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 3.0e-152 542.7 490 60.2
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 5.2e-152 542.0 471 60.9
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 2.4e-149 533.1 434 63.4
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 3.1e-149 532.7 676 47.0
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 7.7e-148 528.1 385 69.6
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.3e-147 527.3 446 59.2
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 5.2e-144 515.4 445 61.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 6.4e-126 455.3 256 83.2
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 7.8e-124 448.4 337 65.3
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 3.2e-101 373.2 243 74.1
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-93 348.2 331 57.1
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 2.1e-92 344.0 332 56.9
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 4.3e-90 336.3 333 58.9
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 5.6e-90 335.9 194 80.4
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 4.5e-87 326.2 333 55.9
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.1e-83 312.8 183 80.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 3.4e-79 300.1 482 38.6
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 2.6e-71 273.9 163 78.5
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.3e-70 271.6 224 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.3e-58 230.3 577 29.8
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 5.3e-56 223.0 607 30.0
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 9.1e-56 222.2 221 54.8
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 5.1e-51 206.5 450 30.9
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 6.3e-41 172.9 138 68.8
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.1e-36 157.9 363 30.3
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 1.2e-34 152.1 108 69.4
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 4.1e-32 143.7 166 47.0
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.4e-24 118.6 82 64.6
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 9.1e-24 115.9 62 82.3
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 5.5e-21 106.7 161 40.4
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.5e-18 98.6 58 74.1
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 4.1e-16 90.5 84 61.9
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 3.3e-13 80.9 154 33.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 2.3e-11 74.7 127 35.4
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 7.5e-10 69.7 173 30.1
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 9.8e-10 69.3 77 53.2
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 3.2e-08 64.3 42 66.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 5.4e-08 63.5 86 38.4


User provided reference genes

Program Settings