Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047596 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 8.8e-81 303.5 148 100.0
CSS0012549 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 1.0e-60 236.9 163 74.8
CSS0017341 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.2e-15 86.3 118 40.7
CSS0010192 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.1e-14 82.0 106 41.5
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.7e-13 79.3 71 49.3
CSS0027439 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 7.8e-13 77.8 49 65.3
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 3.3e-11 72.4 60 53.3
CSS0002063 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.3e-11 72.4 53 58.5
LjContig00564g0012597 Lotus japonicus HOM05D001013 ORTHO05D001703 1.2e-10 70.5 61 45.9
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 2.8e-10 69.3 116 36.2
Atru.chr7.1229 Acer truncatum HOM05D000593 ORTHO05D000562 4.7e-10 68.6 59 49.2
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 4.7e-10 68.6 70 41.4
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 8.1e-10 67.8 76 42.1
Atru.chr4.889 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-09 67.0 67 46.3
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 3.1e-09 65.9 67 44.8
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 4.0e-09 65.5 59 47.5
Ca_05378_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.0e-09 65.5 65 44.6
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 4.0e-09 65.5 66 43.9
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.2e-09 65.1 51 56.9
Atru.chr2.2322 Acer truncatum HOM05D000593 ORTHO05D000562 6.8e-09 64.7 70 44.3
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.2e-08 63.9 61 49.2
Ca_08874_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.2e-08 63.9 164 28.0
FvH4_4g16651 Fragaria vesca HOM05D000593 ORTHO05D004526 1.2e-08 63.9 68 44.1
TWI09G0942 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-08 63.9 65 41.5
Ca_27089_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.5e-08 63.5 63 44.4
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.0e-08 63.2 42 61.9
Ca_14191_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.0e-08 63.2 63 46.0
Ca_22767_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.0e-08 63.2 63 46.0
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 2.0e-08 63.2 73 37.0
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.0e-08 63.2 53 54.7
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.6e-08 62.8 61 49.2
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.6e-08 62.8 63 46.0
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 3.4e-08 62.4 58 50.0
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 3.4e-08 62.4 58 50.0
Ca_04248_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.4e-08 62.4 64 45.3
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 3.4e-08 62.4 64 48.4
Atru.chr1.3005 Acer truncatum HOM05D000593 ORTHO05D000562 4.4e-08 62.0 106 35.8
Ca_23807_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.4e-08 62.0 63 44.4
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.8e-08 61.6 48 56.2
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.8e-08 61.6 48 56.2
CSS0019614 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 9.9e-08 60.8 70 41.4
CSS0027150 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 9.9e-08 60.8 70 41.4
Ca_19793_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 9.9e-08 60.8 64 43.8
FvH4_6g12552 Fragaria vesca HOM05D000593 ORTHO05D000562 9.9e-08 60.8 69 42.0
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.9e-08 60.8 65 41.5
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.9e-08 60.8 65 40.0
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.3e-07 60.5 48 54.2
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.3e-07 60.5 65 44.6
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-07 60.5 63 42.9
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.7e-07 60.1 48 54.2
Ca_12893_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.7e-07 60.1 63 42.9
Ca_23077_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.7e-07 60.1 63 42.9
Ca_04412_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.2e-07 59.7 63 44.4
Ca_26592_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.2e-07 59.7 63 42.9
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.9e-07 59.3 64 43.8
Ca_25309_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.9e-07 59.3 66 43.9
Dinv16416 Davidia involucrata HOM05D000593 ORTHO05D000562 2.9e-07 59.3 49 46.9
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 2.9e-07 59.3 115 28.7
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.8e-07 58.9 48 52.1
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.9e-07 58.5 48 54.2
FAN04G0185 Fragaria x ananassa HOM05D000593 ORTHO05D000562 4.9e-07 58.5 78 39.7
Atru.chr6.964 Acer truncatum HOM05D000593 ORTHO05D000562 6.4e-07 58.2 49 49.0
Ca_07465_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 6.4e-07 58.2 63 44.4
TWI14G0920 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-07 58.2 72 37.5
TWI15G1013 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.4e-07 57.8 65 40.0
PSO386G0211 Papaver somniferum HOM05D000593 ORTHO05D000562 1.1e-06 57.4 104 29.8
TWI36G1214 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-06 57.4 61 41.0
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-06 57.0 72 40.3
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-06 57.0 58 48.3
TWI59G0448 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.4e-06 57.0 59 44.1
Aqoxy1G03120 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.9e-06 56.6 56 42.9
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.9e-06 56.6 37 64.9
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.9e-06 56.6 83 33.7
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-06 56.6 58 37.9
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-06 56.6 58 37.9
Atru.chr11.23 Acer truncatum HOM05D000593 ORTHO05D000562 2.4e-06 56.2 47 51.1
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.4e-06 56.2 47 53.2
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 2.4e-06 56.2 51 45.1
Ca_05086_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.4e-06 56.2 63 41.3
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-06 56.2 63 41.3
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-06 56.2 63 41.3
TWI75G1081 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-06 56.2 51 49.0
Ca_02918_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.2e-06 55.8 63 41.3
Ca_02920_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.2e-06 55.8 63 41.3
Ca_26665_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.2e-06 55.8 61 39.3
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 3.2e-06 55.8 67 34.3
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 3.2e-06 55.8 49 42.9
TWI77G0651 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-06 55.8 41 56.1
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.2e-06 55.5 58 37.9
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.2e-06 55.5 58 37.9
Ca_04645_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.2e-06 55.5 63 38.1
TWI15G0719 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-06 55.5 41 58.5
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.2e-06 55.5 52 48.1
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-06 55.5 58 37.9
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-06 55.5 67 37.3
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.2e-06 55.5 60 40.0
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 5.4e-06 55.1 58 43.1
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 5.4e-06 55.1 42 54.8
Ca_07511_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 5.4e-06 55.1 63 41.3
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 5.4e-06 55.1 48 43.8
Aqoxy4G00461 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 7.1e-06 54.7 72 37.5
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 7.1e-06 54.7 97 29.9
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-06 54.7 60 35.0
Ca_11763_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 9.2e-06 54.3 66 40.9
PSO591G0159 Papaver somniferum HOM05D000593 ORTHO05D000562 9.2e-06 54.3 72 38.9
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 9.2e-06 54.3 72 38.9
PSO724G1186 Papaver somniferum HOM05D000593 ORTHO05D000562 9.2e-06 54.3 67 31.3
TPR.G25714 Trifolium pratense HOM05D000593 ORTHO05D004526 9.2e-06 54.3 59 37.3


User provided reference genes

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