Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047551 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.5e-68 260.8 126 100.0
CSS0037409 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.5e-57 226.1 121 90.9
CSS0011981 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.6e-57 225.3 120 90.0
CSS0039024 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.9e-56 221.1 120 90.0
CSS0027242 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.4e-56 220.7 120 88.3
CSS0048813 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.5e-54 214.9 126 82.5
CSS0026036 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-52 209.9 120 82.5
CSS0049794 Camellia sinensis var. sinensis HOM05D013752 ORTHO05D000352 1.9e-52 209.1 120 80.8
CSS0013021 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-36 156.8 117 66.7
CSS0025589 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-36 156.8 117 66.7
CSS0044602 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-36 156.8 117 66.7
CSS0024310 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.5e-36 155.6 117 65.8
CSS0043892 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.3e-36 155.2 117 65.8
CSS0010738 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.6e-36 154.5 117 65.8
CSS0011394 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.1e-35 152.5 117 65.0
CSS0016775 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.8e-35 152.1 117 66.7
CSS0040353 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.9e-20 102.8 64 76.6
vmacro12970 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 7.1e-15 84.3 109 36.7
vmacro03782 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 9.3e-15 84.0 110 37.3
vmacro05344 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 9.3e-15 84.0 109 37.6
vmacro12133 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.6e-14 83.2 112 39.3
vmacro04112 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro04113 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro04163 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro05736 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro10795 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro12530 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.7e-14 82.4 104 37.5
vmacro12642 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 3.5e-14 82.0 104 37.5
vmacro12925 Vaccinium macrocarpon HOM05D000382 ORTHO05D000352 4.6e-14 81.6 104 37.5
vmacro22814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 4.6e-14 81.6 104 37.5
Rhsim03G0108800 Rhododendron simsii HOM05D000429 ORTHO05D000352 3.0e-13 79.0 110 40.0
vmacro08897 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 3.0e-13 79.0 104 36.5
vmacro12124 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 3.9e-13 78.6 115 33.9
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.1e-13 78.2 115 37.4
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.6e-13 77.8 115 38.3
vmacro19814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 6.6e-13 77.8 106 36.8
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 6.6e-13 77.8 111 38.7
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.3e-12 75.5 117 36.8
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.3e-12 75.5 115 37.4
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.3e-12 75.1 115 38.3
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.6e-12 73.9 115 38.3
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.6e-11 73.2 114 36.8
CSS0036740 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.1e-11 72.8 114 37.7
CSS0027013 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.8e-11 71.6 120 35.8
Rhsim04G0047900 Rhododendron simsii HOM05D000429 ORTHO05D000352 2.4e-10 69.3 110 36.4
FvH4_4g05724 Fragaria vesca HOM05D000429 ORTHO05D000352 5.3e-10 68.2 111 36.0
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 6.9e-10 67.8 119 35.3
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-09 67.0 113 36.3
QL03p039823 Quercus lobata HOM05D000047 ORTHO05D000044 2.0e-09 66.2 111 36.0
TWI77G0887 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.0e-09 66.2 116 31.0
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 2.6e-09 65.9 122 32.0
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 5.8e-09 64.7 117 35.9
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 5.8e-09 64.7 117 35.9
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 7.6e-09 64.3 117 35.9
TWI77G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-09 63.9 114 30.7
TWI18G0195 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-08 63.5 112 32.1
TWI14G1210 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.7e-08 63.2 89 34.8
PSO170G5861 Papaver somniferum HOM05D000429 ORTHO05D002449 2.9e-08 62.4 85 38.8
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-08 62.4 111 36.0
PSO675G2965 Papaver somniferum HOM05D000429 ORTHO05D000352 4.9e-08 61.6 63 42.9
TWI31G0293 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.9e-08 61.6 118 30.5
PSO339G3107 Papaver somniferum HOM05D000429 ORTHO05D000352 1.1e-07 60.5 83 38.6
CANSAT11G2011 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-07 60.1 121 32.2
PSO339G3504 Papaver somniferum HOM05D000429 ORTHO05D000352 1.4e-07 60.1 63 42.9
TWI18G1081 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.1 76 35.5
TWI31G0564 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.1 68 39.7
TWI31G0570 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.1 111 31.5
TWI77G0969 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.1 86 33.7
PSO013G0188 Papaver somniferum HOM05D000429 ORTHO05D000352 2.4e-07 59.3 63 41.3
PSO063G1101 Papaver somniferum HOM05D000429 ORTHO05D000352 2.4e-07 59.3 89 33.7
PSO339G3412 Papaver somniferum HOM05D000429 ORTHO05D000352 2.4e-07 59.3 63 42.9
PSO478G2727 Papaver somniferum HOM05D000429 ORTHO05D000352 2.4e-07 59.3 63 42.9
Rhsim04G0229300 Rhododendron simsii HOM05D000429 ORTHO05D000352 2.4e-07 59.3 83 38.6
CSS0017015 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.2e-07 58.9 88 35.2
PSO384G3956 Papaver somniferum HOM05D000429 ORTHO05D000352 3.2e-07 58.9 89 34.8
TWI39G1108 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.2e-07 58.9 112 30.4
PSO063G2757 Papaver somniferum HOM05D000429 ORTHO05D000352 4.2e-07 58.5 90 32.2
PSO764G0092 Papaver somniferum HOM05D000429 ORTHO05D000352 4.2e-07 58.5 91 34.1
Sed0025965 Sechium edule HOM05D000429 ORTHO05D008058 4.2e-07 58.5 87 35.6
TWI81G0273 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.2e-07 58.5 100 30.0
CSS0009870 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.5e-07 58.2 88 35.2
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 5.5e-07 58.2 64 37.5
PSO339G3268 Papaver somniferum HOM05D000429 ORTHO05D000352 5.5e-07 58.2 63 39.7
PSO357G0207 Papaver somniferum HOM05D000429 ORTHO05D000352 5.5e-07 58.2 63 42.9
Rhsim04G0043100 Rhododendron simsii HOM05D000429 ORTHO05D000352 5.5e-07 58.2 76 40.8
TWI23G0871 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.5e-07 58.2 100 30.0
PSO063G5097 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 63 39.7
PSO210G5452 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 63 41.3
PSO478G4191 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 63 41.3
PSO561G0040 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 63 39.7
PSO675G2651 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 63 39.7
PSO832G2180 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-07 57.8 59 44.1
Rhsim07G0161900 Rhododendron simsii HOM05D000429 ORTHO05D000352 7.1e-07 57.8 61 42.6
CSS0030060 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.3e-07 57.4 88 36.4
CANSAT25G0334 Cannabis sativa HOM05D008422 ORTHO05D000352 9.3e-07 57.4 64 37.5
CANSAT35G1128 Cannabis sativa HOM05D008422 ORTHO05D000352 9.3e-07 57.4 64 37.5
ECA240G3302 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.3e-07 57.4 119 30.3
PSO170G1633 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 63 39.7
PSO384G0300 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 59 42.4
PSO538G0005 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 66 39.4
PSO675G5209 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 63 41.3
PSO699G0030 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 63 41.3
PSO729G0192 Papaver somniferum HOM05D000429 ORTHO05D000352 9.3e-07 57.4 63 39.7
TWI23G0198 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.3e-07 57.4 78 33.3
TWI31G0666 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.3e-07 57.4 103 29.1
BraA08t32791Z Brassica rapa HOM05D000429 ORTHO05D000352 1.2e-06 57.0 108 36.1
CSS0008413 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-06 57.0 88 35.2
CANSAT01G3212 Cannabis sativa HOM05D008422 ORTHO05D000352 1.2e-06 57.0 64 37.5
CANSAT35G1307 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-06 57.0 125 30.4
AUR62041273 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.2e-06 57.0 89 32.6
PSO675G4975 Papaver somniferum HOM05D000429 ORTHO05D000352 1.2e-06 57.0 59 44.1
PSO782G0935 Papaver somniferum HOM05D000429 ORTHO05D000352 1.2e-06 57.0 59 44.1
TWI73G1087 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.2e-06 57.0 100 29.0
CSS0002712 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.6e-06 56.6 64 32.8
CANSAT01G1463 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-06 56.6 86 38.4
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 1.6e-06 56.6 117 27.4
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-06 56.6 96 33.3
CANSAT25G0584 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-06 56.6 110 32.7
PSO135G0823 Papaver somniferum HOM05D000429 ORTHO05D000352 1.6e-06 56.6 63 38.1
PSO724G0211 Papaver somniferum HOM05D000047 ORTHO05D000044 1.6e-06 56.6 73 34.2
QL09p039229 Quercus lobata HOM05D000047 ORTHO05D000044 1.6e-06 56.6 68 36.8
TWI14G1011 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 56.6 91 31.9
TWI31G0584 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 56.6 91 31.9
TWI81G0183 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 56.6 100 29.0
CANSAT01G2226 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-06 56.2 64 37.5
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-06 56.2 95 32.6
CANSAT80G1023 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-06 56.2 64 37.5
PSO339G5891 Papaver somniferum HOM05D000429 ORTHO05D000352 2.1e-06 56.2 49 44.9
QL05p046756 Quercus lobata HOM05D000429 ORTHO05D000352 2.1e-06 56.2 72 41.7
TWI34G1795 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.1e-06 56.2 80 35.0
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.7e-06 55.8 100 30.0
CSS0043325 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.7e-06 55.8 64 32.8
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.7e-06 55.8 100 30.0
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 2.7e-06 55.8 64 35.9
CANSAT25G0712 Cannabis sativa HOM05D008422 ORTHO05D000352 2.7e-06 55.8 64 37.5
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 2.7e-06 55.8 54 42.6
PSO170G6407 Papaver somniferum HOM05D000429 ORTHO05D000352 2.7e-06 55.8 68 41.2
PSO339G2359 Papaver somniferum HOM05D000429 ORTHO05D000352 2.7e-06 55.8 63 38.1
PSO675G2764 Papaver somniferum HOM05D000429 ORTHO05D000352 2.7e-06 55.8 77 41.6
SGA_v2.0_scaffold38G15008 Striga asiatica HOM05D000429 ORTHO05D021023 2.7e-06 55.8 62 41.9
TWI18G0663 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.7e-06 55.8 107 30.8
TWI56G0642 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.7e-06 55.8 120 23.3
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 3.5e-06 55.5 117 26.5
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 3.5e-06 55.5 64 37.5
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 3.5e-06 55.5 100 33.0
AUR62014321 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.5e-06 55.5 118 31.4
PSO063G5149 Papaver somniferum HOM05D000429 ORTHO05D000352 3.5e-06 55.5 63 38.1
PSO384G2953 Papaver somniferum HOM05D000429 ORTHO05D000352 3.5e-06 55.5 63 38.1
PSO478G1612 Papaver somniferum HOM05D000429 ORTHO05D000352 3.5e-06 55.5 116 29.3
PSO782G0641 Papaver somniferum HOM05D000429 ORTHO05D000352 3.5e-06 55.5 49 44.9
PSO832G0969 Papaver somniferum HOM05D000429 ORTHO05D000352 3.5e-06 55.5 59 45.8
TWI09G1035 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI15G0819 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI23G0324 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI36G0915 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI36G1698 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI38G0623 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI38G1293 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI38G1491 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI73G1041 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI77G0286 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
TWI77G0325 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.5e-06 55.5 91 31.9
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.6e-06 55.1 61 36.1
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.6e-06 55.1 61 36.1
PSO063G0759 Papaver somniferum HOM05D000429 ORTHO05D000352 4.6e-06 55.1 49 42.9
PSO675G5468 Papaver somniferum HOM05D000429 ORTHO05D000352 4.6e-06 55.1 45 53.3
TWI14G0816 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.6e-06 55.1 91 29.7
TWI31G0704 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.6e-06 55.1 91 31.9
TWI39G0904 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.6e-06 55.1 91 31.9
TWI75G1625 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.6e-06 55.1 91 29.7
BolC2t10001H Brassica oleracea HOM05D000429 ORTHO05D000880 6.0e-06 54.7 62 41.9
CANSAT54G1278 Cannabis sativa HOM05D008422 ORTHO05D000352 6.0e-06 54.7 59 37.3
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 6.0e-06 54.7 74 31.1
PSO063G0631 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 60 40.0
PSO063G1401 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 63 38.1
PSO210G3647 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 62 38.7
PSO339G4783 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 89 32.6
PSO675G4960 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 66 39.4
PSO832G0657 Papaver somniferum HOM05D000429 ORTHO05D000352 6.0e-06 54.7 91 33.0
TWI18G0220 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.0e-06 54.7 59 40.7
BolC2t10340H Brassica oleracea HOM05D000429 ORTHO05D000352 7.9e-06 54.3 62 43.5
PSO063G4613 Papaver somniferum HOM05D000429 ORTHO05D002449 7.9e-06 54.3 59 42.4
PSO210G2847 Papaver somniferum HOM05D000429 ORTHO05D000352 7.9e-06 54.3 59 44.1
TWI38G1677 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.9e-06 54.3 91 31.9
TWI59G1479 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.9e-06 54.3 91 31.9


User provided reference genes

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