Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.6e-138 496.1 252 100.0
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.6e-53 213.8 160 72.5
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 9.4e-51 204.5 166 65.1
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 4.2e-43 179.1 166 60.2
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.8e-41 173.7 166 57.2
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 8.8e-41 171.4 163 57.7
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 5.7e-40 168.7 160 59.4
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.3e-39 167.5 164 56.7
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 2.8e-39 166.4 162 54.9
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.8e-38 163.7 164 52.4
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 4.1e-38 162.5 158 55.1
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 5.4e-38 162.2 168 54.8
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 7.0e-38 161.8 160 54.4
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 2.7e-37 159.8 167 52.1
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 3.5e-37 159.5 167 53.3
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 7.7e-37 158.3 113 75.2
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.3e-36 157.5 158 54.4
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 6.6e-36 155.2 164 51.2
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.5e-35 153.3 163 50.9
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.3e-35 152.9 166 53.6
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.2e-34 151.0 158 55.7
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.6e-34 149.4 166 51.2
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 3.6e-34 149.4 158 54.4
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 4.7e-34 149.1 161 51.6
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 4.7e-34 149.1 158 54.4
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 6.1e-34 148.7 160 53.8
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 8.0e-34 148.3 165 50.3
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.8e-33 147.1 160 53.8
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.3e-33 146.7 160 53.1
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.0e-33 146.0 166 50.0
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 2.6e-32 143.3 163 49.1
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 9.8e-32 141.4 220 38.2
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 9.8e-32 141.4 163 52.1
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 9.8e-32 141.4 156 49.4
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.3e-31 141.0 163 47.9
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.7e-31 140.6 120 66.7
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 4.9e-31 139.0 165 43.0
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 8.3e-31 138.3 105 68.6
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.1e-30 137.9 165 47.9
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.4e-30 137.5 162 46.3
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.4e-30 136.7 159 47.8
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.4e-30 136.7 139 52.5
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 3.2e-30 136.3 159 48.4
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.1e-30 136.0 172 48.3
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 4.1e-30 136.0 164 48.8
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 7.0e-30 135.2 164 47.0
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 9.2e-30 134.8 166 46.4
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.2e-29 134.4 164 43.3
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.6e-29 134.0 162 45.7
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.6e-29 134.0 167 45.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 2.0e-29 133.7 159 49.1
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.7e-29 133.3 164 50.0
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 3.5e-29 132.9 164 43.9
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 4.5e-29 132.5 159 47.2
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 7.8e-29 131.7 164 46.3
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.3e-28 131.0 164 42.7
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.3e-28 131.0 166 44.6
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.3e-28 131.0 164 43.3
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.3e-28 131.0 156 50.0
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.7e-28 130.6 160 46.9
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.9e-28 129.8 164 43.3
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.9e-28 129.8 170 43.5
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.6e-28 128.3 187 44.4
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.9e-27 127.1 187 44.9
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 2.5e-27 126.7 162 50.0
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 4.3e-27 125.9 163 41.1
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 5.6e-27 125.6 161 46.6
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 7.3e-27 125.2 130 57.7
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 9.5e-27 124.8 123 53.7
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.6e-26 124.0 164 39.0
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 4.7e-26 122.5 159 44.0
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 6.1e-26 122.1 175 41.7
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 6.1e-26 122.1 175 44.0
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.4e-25 120.9 165 41.8
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 3.1e-25 119.8 162 41.4
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 4.0e-25 119.4 168 41.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 4.0e-25 119.4 166 43.4
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 5.2e-25 119.0 168 41.1
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 6.8e-25 118.6 170 41.2
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 8.9e-25 118.2 133 48.9
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 8.9e-25 118.2 133 48.9
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.2e-24 117.9 120 55.8
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.5e-24 117.5 169 41.4
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.6e-24 116.7 169 43.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 3.7e-23 112.8 137 45.3
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.4e-22 110.2 156 43.6
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.2e-22 109.8 112 51.8
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 5.4e-22 109.0 145 44.1
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.5e-21 106.3 159 40.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.0e-20 104.8 154 41.6
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.7e-20 104.0 161 39.8
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 3.9e-20 102.8 152 42.8
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-17 94.0 79 58.2
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 6.8e-17 92.0 145 37.9
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 9.8e-16 88.2 102 52.9
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.7e-13 80.1 165 32.7
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 6.0e-13 79.0 163 33.7
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 6.6e-12 75.5 164 30.5
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 4.3e-11 72.8 78 48.7
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.3e-09 67.0 156 30.8
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.1e-09 66.6 156 30.8
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.6e-08 63.5 120 38.3
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.1e-06 58.2 143 32.9
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.4e-06 57.8 87 37.9


User provided reference genes

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