Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.3e-151 538.9 277 100.0
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 5.6e-113 411.4 278 82.0
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.1e-107 392.9 282 78.4
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-65 252.7 307 52.8
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.8e-48 196.4 155 74.2
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.6e-43 179.5 183 58.5
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.6e-35 152.9 177 55.9
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.3e-34 150.2 177 56.5
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 6.3e-32 142.1 273 38.1
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 2.9e-29 133.3 294 36.7
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.5e-28 130.2 147 53.1
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 5.5e-28 129.0 136 56.6
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.6e-27 127.5 131 58.8
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 2.4e-23 113.6 238 35.3
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-20 101.7 285 32.3
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-17 93.6 266 32.0
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-15 88.2 297 30.3
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 5.4e-15 85.9 61 60.7
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 5.4e-15 85.9 61 60.7
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 5.4e-15 85.9 61 60.7
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-14 83.6 226 33.6
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 2.7e-14 83.6 325 27.4
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 2.7e-14 83.6 216 32.4
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 1.3e-13 81.3 119 38.7
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 2.3e-13 80.5 160 38.1
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 2.9e-13 80.1 260 25.8
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-13 79.7 289 30.8
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-13 79.7 289 30.8
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-13 79.3 52 86.5
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.1e-12 78.2 237 30.8
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-12 77.8 255 28.2
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-11 73.6 253 27.7
Manes.14G014236 Manihot esculenta HOM05D011157 ORTHO05D000047 4.0e-10 69.7 69 47.8
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 2.0e-09 67.4 242 26.0
Manes.06G030033 Manihot esculenta HOM05D000002 ORTHO05D000047 3.4e-09 66.6 132 40.9
ClCG11G009140 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.5e-09 65.5 249 28.5
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 7.5e-09 65.5 334 24.0
Aqoxy7G01998 Aquilegia oxysepala HOM05D000002 ORTHO05D000047 2.9e-08 63.5 88 43.2
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-08 63.2 95 45.3
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.9e-08 62.8 267 26.2
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.9e-08 62.8 267 26.2
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 4.9e-08 62.8 276 26.4
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-08 62.4 267 26.2
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.4e-08 62.4 291 22.3
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.3e-08 62.0 267 26.2
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.3e-08 62.0 267 26.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.3e-08 62.0 267 26.2
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.3e-08 62.0 267 26.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.3e-08 62.0 267 26.2
Manes.07G095804 Manihot esculenta HOM05D000002 ORTHO05D000047 1.1e-07 61.6 134 39.6
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.4e-07 61.2 267 26.2
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 1.4e-07 61.2 238 24.4
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-07 60.8 284 23.9
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.8e-07 60.8 246 26.0
CSS0008068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.2e-07 60.1 275 24.4
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.1e-07 59.7 115 38.3
Manes.11G110050 Manihot esculenta HOM05D000002 ORTHO05D000047 9.2e-07 58.5 63 47.6
CSS0003799 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.6e-06 57.8 46 58.7
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 1.6e-06 57.8 61 42.6
vmacro17778 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 1.6e-06 57.8 60 48.3
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 1.6e-06 57.8 300 26.0
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 2.0e-06 57.4 238 23.5
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.7e-06 57.0 64 51.6
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 2.7e-06 57.0 283 24.0
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.9e-06 55.8 121 36.4
CiPaw.01G278500 Carya illinoinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.5 140 34.3
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-06 55.5 234 24.8


User provided reference genes

Program Settings