Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.7e-183 645.2 326 100.0
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.9e-178 626.7 326 98.2
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 7.1e-51 205.3 221 56.1
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.4e-45 186.4 383 38.9
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-44 184.5 353 41.6
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.6e-42 176.4 368 39.9
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.6e-42 176.4 368 39.9
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 4.7e-34 149.4 387 34.6
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 9.7e-32 141.7 395 32.7
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.4e-30 137.9 389 32.9
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 7.7e-29 132.1 373 32.2
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.7e-28 131.0 372 29.6
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 8.5e-28 128.6 352 34.7
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.4e-27 127.9 367 31.3
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.9e-25 119.8 363 31.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 2.6e-24 117.1 399 30.3
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.6e-24 117.1 374 29.7
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 7.4e-24 115.5 365 31.0
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-23 114.4 340 31.8
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.7e-23 114.4 349 28.7
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.8e-23 113.6 366 31.1
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.8e-23 112.8 317 31.2
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 4.8e-23 112.8 348 31.0
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.4e-22 111.3 354 30.5
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.4e-22 111.3 354 30.5
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.8e-22 110.9 371 31.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 5.3e-22 109.4 347 30.5
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.6e-21 107.1 345 31.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.9e-20 103.6 322 29.8
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.9e-20 103.6 137 44.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 3.8e-20 103.2 344 27.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.5e-20 102.1 322 30.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 8.5e-20 102.1 383 28.2
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 8.5e-20 102.1 392 30.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.1e-19 101.7 372 29.0
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.5e-19 101.3 358 29.1
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.9e-19 100.9 322 30.1
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.9e-19 100.9 376 28.7
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.5e-19 100.5 358 30.7
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.2e-19 100.1 335 30.1
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.2e-19 99.8 366 28.7
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.5e-19 99.4 359 27.6
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.2e-19 99.0 368 29.9
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.6e-18 97.8 339 28.6
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 2.7e-18 97.1 345 31.0
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 2.7e-18 97.1 315 31.1
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.7e-18 97.1 358 28.2
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 2.7e-18 97.1 339 29.5
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 3.6e-18 96.7 366 28.7
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.0e-17 95.1 357 27.2
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.0e-17 95.1 368 30.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-17 95.1 332 29.2
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 3.0e-17 93.6 350 29.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 3.0e-17 93.6 389 30.3
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.5e-16 91.3 357 29.1
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.5e-16 91.3 340 28.8
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.0e-16 90.9 313 31.3
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.0e-16 90.9 357 31.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.6e-16 90.5 389 28.5
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 3.3e-16 90.1 354 28.2
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 5.7e-16 89.4 369 29.0
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.3e-15 88.2 351 29.3
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.2e-15 87.4 211 32.7
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.2e-15 87.4 312 27.9
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 4.8e-15 86.3 98 42.9
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 8.2e-15 85.5 357 25.8
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 8.2e-15 85.5 350 29.1
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.2e-15 85.5 353 29.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.4e-14 84.7 348 28.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.4e-14 84.7 337 27.6
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 7.0e-14 82.4 338 25.7
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 1.2e-13 81.6 327 26.6
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 2.0e-13 80.9 369 25.7
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 2.7e-13 80.5 356 28.1
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.5e-13 80.1 355 24.2
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 3.5e-13 80.1 348 26.7
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 3.5e-13 80.1 344 27.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 3.5e-13 80.1 355 24.5
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 5.9e-13 79.3 315 29.2
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.0e-12 78.6 372 26.6
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.3e-12 78.2 342 27.8
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 2.2e-12 77.4 348 27.0
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 8.5e-12 75.5 370 26.5
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.5e-12 75.5 193 31.1
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 2.5e-11 73.9 342 27.8
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 3.2e-11 73.6 329 25.5
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 2.7e-10 70.5 343 25.9
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 3.6e-10 70.1 341 27.3
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.6e-10 70.1 350 24.6
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.7e-10 69.7 112 35.7
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 4.7e-10 69.7 348 24.7
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.0e-10 68.9 193 32.6
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.3e-09 67.4 314 26.1
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-08 65.1 112 37.5
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.5e-08 64.7 340 25.3
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 2.0e-08 64.3 185 28.6
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.2e-07 60.8 348 23.9
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 3.7e-07 60.1 352 23.6
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.3e-07 59.3 103 42.7
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 8.3e-07 58.9 185 30.3
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 4.1e-06 56.6 371 24.5
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 7.0e-06 55.8 383 24.0


User provided reference genes

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