Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047439 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 1.6e-86 322.8 169 100.0
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 3.7e-83 311.6 184 91.3
Rhsim04G0241400 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.8e-29 133.3 142 54.2
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.3e-24 116.3 176 44.3
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.3e-24 116.3 176 44.3
Ciclev10006511m.g Citrus clementina HOM05D001578 ORTHO05D001207 3.0e-24 115.9 176 42.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 1.4e-21 107.1 179 41.9
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 4.4e-20 102.1 172 38.4
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.4e-18 97.1 172 35.5
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.1e-17 93.2 172 34.9
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.0e-17 91.7 172 34.3
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.9e-15 86.7 104 49.0
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.5e-15 86.3 177 36.2
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.6e-14 83.6 169 33.7
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.3e-13 79.7 157 33.8
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.0e-12 76.6 161 31.1
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 4.4e-12 75.5 172 35.5
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 7.5e-12 74.7 176 33.0
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 7.5e-12 74.7 176 33.0
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 2.2e-11 73.2 154 33.8
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.4e-11 71.6 176 30.1
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 6.4e-11 71.6 176 30.1
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 6.4e-11 71.6 172 32.0
Duzib052G0195 Durio zibethinus HOM05D001578 ORTHO05D001207 8.3e-11 71.2 161 32.9
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.4e-10 70.5 176 32.4
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 1.9e-10 70.1 175 32.0
TWI09G1118 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 2.4e-10 69.7 150 34.7
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 4.1e-10 68.9 173 32.9
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 1.2e-09 67.4 161 31.1
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 1.6e-09 67.0 150 30.0
CARHR092410 Cardamine hirsuta HOM05D009524 ORTHO05D001207 2.7e-09 66.2 177 28.2
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.7e-09 66.2 153 30.7
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.7e-09 66.2 148 29.7
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.5e-09 65.9 176 30.7
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.5e-09 65.9 177 30.5
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 3.5e-09 65.9 182 30.8
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 3.5e-09 65.9 162 27.8
PGR031G2424 Punica granatum HOM05D001578 ORTHO05D001207 4.6e-09 65.5 176 29.5
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 4.6e-09 65.5 155 32.3
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.0e-09 65.1 183 30.1
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 6.0e-09 65.1 171 31.0
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 6.0e-09 65.1 166 31.9
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 6.0e-09 65.1 172 31.4
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 6.0e-09 65.1 173 29.5
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 7.8e-09 64.7 114 34.2
Cpa.g.sc9.27 Carica papaya HOM05D001578 ORTHO05D001207 1.0e-08 64.3 176 33.0
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.0e-08 64.3 168 26.8
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.0e-08 64.3 159 28.9
Potri.009G083500 Populus trichocarpa HOM05D001578 ORTHO05D001207 1.0e-08 64.3 174 27.6
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 1.0e-08 64.3 167 29.3
AL3G30140 Arabidopsis lyrata HOM05D009524 ORTHO05D001207 1.3e-08 63.9 158 30.4
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 1.3e-08 63.9 179 30.7
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 1.3e-08 63.9 147 28.6
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.7e-08 63.5 168 26.8
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.7e-08 63.5 168 26.8
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 1.7e-08 63.5 149 30.9
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.7e-08 63.5 177 29.4
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 2.3e-08 63.2 175 30.3
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 2.3e-08 63.2 173 31.2
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 3.0e-08 62.8 172 30.2
Duzib177G0524 Durio zibethinus HOM05D001578 ORTHO05D001207 3.0e-08 62.8 150 29.3
Thhalv10022234m.g Eutrema salsugineum HOM05D009524 ORTHO05D001207 3.0e-08 62.8 148 29.7
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 3.0e-08 62.8 170 30.0
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 3.0e-08 62.8 170 30.0
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 3.0e-08 62.8 140 32.9
Manes.15G098100 Manihot esculenta HOM05D001578 ORTHO05D001207 3.0e-08 62.8 157 28.0
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 3.9e-08 62.4 183 31.1
Thecc.04G305000 Theobroma cacao HOM05D001578 ORTHO05D001207 3.9e-08 62.4 150 28.7
Medtr4g122760 Medicago truncatula HOM05D001578 ORTHO05D001207 5.1e-08 62.0 147 29.3
Sabra10G0043700 Salix brachista HOM05D001578 ORTHO05D001207 5.1e-08 62.0 181 31.5
TWI53G0804 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 5.1e-08 62.0 173 31.8
A01p37140 Brassica napus HOM05D009524 ORTHO05D001207 6.6e-08 61.6 177 30.5
BraA01t03775Z Brassica rapa HOM05D009524 ORTHO05D001207 6.6e-08 61.6 177 30.5
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 6.6e-08 61.6 169 28.4
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 6.6e-08 61.6 170 30.0
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 6.6e-08 61.6 174 29.9
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 1.1e-07 60.8 170 25.3
Lsat_1_v5_gn_6_301 Lactuca sativa HOM05D001578 ORTHO05D001207 1.1e-07 60.8 149 31.5
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.5e-07 60.5 152 28.9
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 1.9e-07 60.1 175 28.6
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.9e-07 60.1 148 32.4
Rhsim03G0038600 Rhododendron simsii HOM05D000036 ORTHO05D005472 1.9e-07 60.1 118 33.9
Cpa.g.sc9.25 Carica papaya HOM05D001578 ORTHO05D001207 2.5e-07 59.7 173 29.5
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 2.5e-07 59.7 172 29.1
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 2.5e-07 59.7 160 28.1
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 2.5e-07 59.7 175 26.3
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 2.5e-07 59.7 147 31.3
Prupe.3G007900 Prunus persica HOM05D001445 ORTHO05D001207 2.5e-07 59.7 150 28.0
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 2.5e-07 59.7 173 28.3
A03p07210 Brassica napus HOM05D009524 ORTHO05D001207 3.3e-07 59.3 175 29.7
A06p04790 Brassica napus HOM05D001578 ORTHO05D001207 3.3e-07 59.3 156 30.1
BraA03t10043Z Brassica rapa HOM05D009524 ORTHO05D001207 3.3e-07 59.3 175 29.7
MBI18_g25089_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 3.3e-07 59.3 174 28.7
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 3.3e-07 59.3 126 31.7
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 3.3e-07 59.3 144 30.6
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 4.3e-07 58.9 172 29.1
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 4.3e-07 58.9 174 29.9
Actinidia21379 Actinidia chinensis HOM05D001578 ORTHO05D001207 5.6e-07 58.5 159 33.3
AT3G17152 Arabidopsis thaliana HOM05D009524 ORTHO05D001207 5.6e-07 58.5 175 29.1
BraA06t23683Z Brassica rapa HOM05D001578 ORTHO05D001207 5.6e-07 58.5 156 30.1
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 5.6e-07 58.5 147 29.9
HanXRQChr13g0395221 Helianthus annuus HOM05D001578 ORTHO05D001207 5.6e-07 58.5 147 29.3
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 5.6e-07 58.5 178 31.5
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 7.3e-07 58.2 174 31.0
Gohir.A05G275500 Gossypium hirsutum HOM05D001578 ORTHO05D001207 7.3e-07 58.2 172 25.6
MBI04_g11519_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D005233 7.3e-07 58.2 174 30.5
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 9.5e-07 57.8 147 29.9
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 9.5e-07 57.8 147 32.0
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 9.5e-07 57.8 123 31.7
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 9.5e-07 57.8 149 30.2
BcaB04g20858 Brassica carinata HOM05D009524 ORTHO05D001207 1.2e-06 57.4 149 31.5
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 1.2e-06 57.4 172 30.8
Gohir.D05G277600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.2e-06 57.4 174 25.3
Gorai.009G290600 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.2e-06 57.4 152 27.0
BcaB04g20860 Brassica carinata HOM05D009524 ORTHO05D001207 1.6e-06 57.0 148 29.7
CARHR287460 Cardamine hirsuta HOM05D004113 ORTHO05D005233 1.6e-06 57.0 170 30.6
Peaxi162Scf00228g00064 Petunia axillaris HOM05D001578 ORTHO05D001207 1.6e-06 57.0 160 29.4
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 1.6e-06 57.0 173 27.2
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.1e-06 56.6 173 26.0
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 2.1e-06 56.6 156 29.5
Glyma.17G036400 Glycine max HOM05D001578 ORTHO05D001207 2.1e-06 56.6 175 28.6
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 2.1e-06 56.6 152 29.6
Medtr4g122750 Medicago truncatula HOM05D001578 ORTHO05D001207 2.1e-06 56.6 169 26.6
ECA233G5780 Erigeron canadensis HOM05D001578 ORTHO05D001207 2.8e-06 56.2 147 27.9
Lalb_Chr07g0181931 Lupinus albus HOM05D001578 ORTHO05D001207 2.8e-06 56.2 174 26.4
Phvul.003G117300 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.8e-06 56.2 171 28.1
BolC1t04674H Brassica oleracea HOM05D009524 ORTHO05D001207 3.6e-06 55.8 177 29.9
Lalb_Chr15g0089141 Lupinus albus HOM05D013061 ORTHO05D019266 3.6e-06 55.8 151 27.8
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 4.7e-06 55.5 147 28.6
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 4.7e-06 55.5 147 28.6
BolC6t35358H Brassica oleracea HOM05D001578 ORTHO05D001207 4.7e-06 55.5 147 28.6
CARHR278590 Cardamine hirsuta HOM05D004113 ORTHO05D005233 4.7e-06 55.5 176 29.0
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 4.7e-06 55.5 187 28.3
BcaB07g33804 Brassica carinata HOM05D001578 ORTHO05D001207 6.2e-06 55.1 147 28.6
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 6.2e-06 55.1 173 28.3
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 6.2e-06 55.1 175 30.3
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 6.2e-06 55.1 143 28.7
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 6.2e-06 55.1 176 30.1
Potri.001G109700 Populus trichocarpa HOM05D023468 ORTHO05D022406 6.2e-06 55.1 175 25.7
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 6.2e-06 55.1 178 27.5
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 8.1e-06 54.7 175 27.4
CARHR037580 Cardamine hirsuta HOM05D001578 ORTHO05D001207 8.1e-06 54.7 147 29.3
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 8.1e-06 54.7 173 27.7
Psat0s740g0160 Pisum sativum HOM05D001578 ORTHO05D001207 8.1e-06 54.7 165 23.0


User provided reference genes

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