Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.6e-73 279.3 136 100.0
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 4.7e-73 277.7 136 99.3
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 7.6e-63 243.8 134 87.3
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 1.2e-55 219.9 134 79.9
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 7.6e-55 217.2 134 77.6
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 1.7e-54 216.1 135 79.3
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 6.4e-54 214.2 133 75.9
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 1.4e-53 213.0 135 76.3
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 1.4e-53 213.0 115 87.0
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 1.9e-53 212.6 133 75.2
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 2.4e-53 212.2 134 77.6
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 3.2e-53 211.8 133 75.9
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 4.2e-53 211.5 130 79.2
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 9.3e-53 210.3 133 75.9
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.1e-52 209.1 135 75.6
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 4.6e-52 208.0 115 84.3
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 4.6e-52 208.0 132 77.3
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 7.8e-52 207.2 114 85.1
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 1.3e-51 206.5 131 77.1
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.7e-51 206.1 114 84.2
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 1.7e-51 206.1 135 72.6
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 2.3e-51 205.7 128 77.3
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 3.9e-51 204.9 115 81.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 3.9e-51 204.9 135 75.6
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 5.1e-51 204.5 128 77.3
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 6.6e-51 204.1 132 74.2
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 8.7e-51 203.8 123 76.4
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 1.1e-50 203.4 128 76.6
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.1e-50 203.4 132 74.2
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.5e-50 203.0 124 77.4
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.5e-50 203.0 136 75.7
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 1.5e-50 203.0 113 86.7
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 2.5e-50 202.2 115 80.9
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 2.5e-50 202.2 131 75.6
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 4.3e-50 201.4 124 78.2
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 4.3e-50 201.4 133 71.4
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 5.6e-50 201.1 120 79.2
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 5.6e-50 201.1 114 83.3
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 7.3e-50 200.7 128 75.0
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 9.6e-50 200.3 115 82.6
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 9.6e-50 200.3 122 77.9
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 9.6e-50 200.3 129 73.6
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 1.3e-49 199.9 125 74.4
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.3e-49 199.9 114 81.6
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 1.3e-49 199.9 115 81.7
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.3e-49 199.9 129 73.6
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 1.3e-49 199.9 131 74.0
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.6e-49 199.5 115 77.4
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 1.6e-49 199.5 125 73.6
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 1.6e-49 199.5 128 75.8
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 2.1e-49 199.1 114 82.5
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.1e-49 199.1 115 79.1
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 2.1e-49 199.1 128 75.0
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 2.1e-49 199.1 136 70.6
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 6.2e-49 197.6 123 74.8
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 6.2e-49 197.6 123 74.8
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 6.2e-49 197.6 133 72.9
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 8.1e-49 197.2 128 71.9
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 8.1e-49 197.2 118 78.8
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.1e-48 196.8 132 72.7
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 1.4e-48 196.4 133 72.2
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 1.4e-48 196.4 114 79.8
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 1.8e-48 196.1 115 80.0
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 2.4e-48 195.7 136 69.9
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 2.4e-48 195.7 113 78.8
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 3.1e-48 195.3 112 81.2
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.1e-48 195.3 110 81.8
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 4.0e-48 194.9 124 74.2
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 5.3e-48 194.5 128 71.9
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 9.0e-48 193.7 124 71.0
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.0e-47 192.6 114 78.1
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 2.0e-47 192.6 131 71.8
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 2.0e-47 192.6 115 75.7
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 2.6e-47 192.2 123 76.4
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 3.4e-47 191.8 114 78.1
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 3.4e-47 191.8 114 76.3
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 3.4e-47 191.8 116 77.6
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 5.8e-47 191.0 124 71.8
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 5.8e-47 191.0 124 71.8
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 5.8e-47 191.0 124 71.8
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 5.8e-47 191.0 134 70.9
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 7.6e-47 190.7 119 73.1
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 9.9e-47 190.3 113 77.0
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 1.7e-46 189.5 124 71.8
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.7e-46 189.5 119 74.8
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 3.8e-46 188.3 115 75.7
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 4.9e-46 188.0 112 76.8
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 4.9e-46 188.0 127 67.7
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 6.4e-46 187.6 124 71.0
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 8.4e-46 187.2 115 73.9
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 8.4e-46 187.2 130 70.8
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 1.4e-45 186.4 112 75.0
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 1.6e-44 183.0 112 73.2
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 2.7e-44 182.2 131 63.4
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 2.7e-44 182.2 114 74.6
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 3.5e-44 181.8 111 76.6
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.6e-41 172.9 114 70.2
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 6.9e-40 167.5 102 74.5
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 9.0e-40 167.2 97 78.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 2.9e-38 162.2 112 67.0
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 9.3e-37 157.1 97 75.3
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 6.7e-35 151.0 116 60.3
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 8.2e-33 144.1 83 81.9
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 5.3e-32 141.4 82 78.0
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 2.0e-31 139.4 105 67.6
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 9.7e-26 120.6 67 88.1
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 9.0e-24 114.0 112 49.1
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 2.0e-23 112.8 76 75.0
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 2.0e-23 112.8 114 52.6
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.0e-22 110.5 110 49.1
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.7e-22 109.8 112 47.3
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.1e-20 102.8 122 43.4
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 7.9e-12 74.3 44 84.1
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 3.3e-10 68.9 48 75.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 3.3e-10 68.9 48 75.0
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 1.5e-07 60.1 38 78.9
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 8.5e-06 54.3 38 71.1
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 8.5e-06 54.3 38 71.1


User provided reference genes

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