Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047420 Camellia sinensis var. sinensis HOM05D007190 ORTHO05D009130 6.6e-47 190.3 91 100.0
Actinidia30444 Actinidia chinensis HOM05D007190 ORTHO05D009130 1.9e-30 135.6 89 77.5
Rhsim04G0073500 Rhododendron simsii HOM05D007190 ORTHO05D009130 7.6e-27 123.6 89 73.0
Aqoxy1G03215 Aquilegia oxysepala HOM05D007190 ORTHO05D009130 6.5e-26 120.6 87 69.0
Oeu038788.1 Olea europaea HOM05D007190 ORTHO05D009130 1.1e-25 119.8 86 68.6
GSVIVG01020671001 Vitis vinifera HOM05D007190 ORTHO05D009130 4.2e-25 117.9 89 70.8
Cc05_g08090 Coffea canephora HOM05D007190 ORTHO05D009130 1.0e-23 113.2 89 62.9
Gohir.D09G001900 Gossypium hirsutum HOM05D007190 ORTHO05D009130 1.8e-23 112.5 93 65.6
Gorai.006G002000 Gossypium raimondii HOM05D007190 ORTHO05D009130 1.8e-23 112.5 93 65.6
Gohir.A09G002200 Gossypium hirsutum HOM05D007190 ORTHO05D009130 3.9e-23 111.3 93 65.6
Peaxi162Scf00241g00919 Petunia axillaris HOM05D007190 ORTHO05D009130 1.9e-22 109.0 84 63.1
Potri.019G090600 Populus trichocarpa HOM05D007190 ORTHO05D009130 1.9e-22 109.0 93 63.4
FvH4_6g27080 Fragaria vesca HOM05D007190 ORTHO05D009130 7.4e-22 107.1 75 72.0
FAN14G3381 Fragaria x ananassa HOM05D007190 ORTHO05D009130 7.4e-22 107.1 75 72.0
Thecc.01G243100 Theobroma cacao HOM05D007190 ORTHO05D009130 9.7e-22 106.7 93 61.3
Duzib264G1175 Durio zibethinus HOM05D007190 ORTHO05D009130 1.3e-21 106.3 92 63.0
CANSAT64G0866 Cannabis sativa HOM05D007190 ORTHO05D009130 1.6e-21 105.9 87 64.4
CiPaw.03G185700 Carya illinoinensis HOM05D007190 ORTHO05D009130 2.2e-21 105.5 93 61.3
ClCG09G011360 Citrullus lanatus HOM05D007190 ORTHO05D009130 2.2e-21 105.5 93 61.3
Sed0016786 Sechium edule HOM05D007190 ORTHO05D009130 2.2e-21 105.5 95 58.9
Cpa.g.sc209.23 Carica papaya HOM05D007190 ORTHO05D009130 3.7e-21 104.8 92 62.0
MBI07_g17046_MAGBIO Magnolia biondii HOM05D007190 ORTHO05D009130 3.7e-21 104.8 87 63.2
MD09G1240300 Malus domestica HOM05D007190 ORTHO05D009130 4.8e-21 104.4 81 66.7
Solyc10g008060.4 Solanum lycopersicum HOM05D007190 ORTHO05D009130 4.8e-21 104.4 88 59.1
Sabra19G0100800 Salix brachista HOM05D007190 ORTHO05D009130 6.3e-21 104.0 93 60.2
Sabra19G0104200 Salix brachista HOM05D007190 ORTHO05D009130 6.3e-21 104.0 93 60.2
PSO675G8657 Papaver somniferum HOM05D007190 ORTHO05D009130 8.2e-21 103.6 88 62.5
QL08p041327 Quercus lobata HOM05D007190 ORTHO05D009130 1.1e-20 103.2 93 60.2
Atru.chr6.2820 Acer truncatum HOM05D007190 ORTHO05D009130 1.4e-20 102.8 92 63.0
RcHm_v2.0_Chr2g0129041 Rosa chinensis HOM05D007190 ORTHO05D009130 1.4e-20 102.8 77 67.5
Sopen10g003930 Solanum pennellii HOM05D007190 ORTHO05D009130 1.4e-20 102.8 88 58.0
Manes.13G138800 Manihot esculenta HOM05D007190 ORTHO05D009130 2.4e-20 102.1 77 66.2
Migut.H02153 Erythranthe guttata HOM05D007190 ORTHO05D009130 3.1e-20 101.7 86 60.5
Eucgr.K01098 Eucalyptus grandis HOM05D007190 ORTHO05D009130 3.1e-20 101.7 85 63.5
MELO3C014352.2 Cucumis melo HOM05D007190 ORTHO05D009130 4.1e-20 101.3 93 59.1
PGSC0003DMG400010559 Solanum tuberosum HOM05D007190 ORTHO05D009130 4.1e-20 101.3 88 58.0
Lsat_1_v5_gn_8_139680 Lactuca sativa HOM05D007190 ORTHO05D009130 5.3e-20 100.9 91 58.2
Lj3g0015265 Lotus japonicus HOM05D007190 ORTHO05D009130 5.3e-20 100.9 77 66.2
Phvul.005G096600 Phaseolus vulgaris HOM05D007190 ORTHO05D009130 6.9e-20 100.5 78 69.2
Cfa014712 Carpinus fangiana HOM05D007190 ORTHO05D009130 9.0e-20 100.1 93 59.1
Ca_01466_v3 Cicer arietinum L. HOM05D007190 ORTHO05D009130 9.0e-20 100.1 92 59.8
VMungo1080G0348 Vigna mungo HOM05D007190 ORTHO05D009130 9.0e-20 100.1 78 69.2
HPP92_004047 Vanilla planifolia HOM05D007190 ORTHO05D009130 1.2e-19 99.8 86 61.6
Medtr2g091140 Medicago truncatula HOM05D007190 ORTHO05D009130 1.5e-19 99.4 91 60.4
Glyma.12G209200 Glycine max HOM05D007190 ORTHO05D009130 2.0e-19 99.0 78 69.2
arahy.Tifrunner.gnm1.ann1.Y5LIHD Arachis hypogaea HOM05D007190 ORTHO05D009130 2.6e-19 98.6 79 64.6
CAN.G782.8 Capsicum annuum HOM05D007190 ORTHO05D009130 3.4e-19 98.2 88 56.8
MSTRG.20320 Avicennia marina HOM05D007190 ORTHO05D009130 4.5e-19 97.8 86 60.5
HPP92_004056 Vanilla planifolia HOM05D007190 ORTHO05D009130 4.5e-19 97.8 86 60.5
ATR0602G260 Amborella trichopoda HOM05D007190 ORTHO05D009130 5.9e-19 97.4 78 64.1
Prupe.3G124300 Prunus persica HOM05D007190 ORTHO05D009130 7.6e-19 97.1 77 64.9
Ah.01g003840 Amaranthus hybridus HOM05D007190 ORTHO05D009130 1.0e-18 96.7 85 57.6
ECA233G1920 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-18 96.7 91 57.1
SalBow7G3091 Salvia bowleyana HOM05D007190 ORTHO05D009130 1.0e-18 96.7 62 75.8
PGR142G3516 Punica granatum HOM05D007190 ORTHO05D009130 2.9e-18 95.1 87 58.6
Aa31LG1G7260 Aethionema arabicum HOM05D007190 ORTHO05D009130 5.0e-18 94.4 93 55.9
HanXRQChr13g0392321 Helianthus annuus HOM05D007190 ORTHO05D009130 5.0e-18 94.4 87 57.5
Hund07837 Selenicereus undatus HOM05D007190 ORTHO05D009130 5.0e-18 94.4 85 56.5
CARHR005780 Cardamine hirsuta HOM05D007190 ORTHO05D009130 6.5e-18 94.0 93 54.8
TPR.G11579 Trifolium pratense HOM05D007190 ORTHO05D009130 6.5e-18 94.0 92 57.6
BolC8t47036H Brassica oleracea HOM05D007190 ORTHO05D009130 8.5e-18 93.6 93 54.8
Thhalv10007851m.g Eutrema salsugineum HOM05D007190 ORTHO05D009130 8.5e-18 93.6 93 54.8
Zm00001eb119970 Zea mays HOM05D007190 ORTHO05D009130 8.5e-18 93.6 87 57.5
BraA08t35513Z Brassica rapa HOM05D007190 ORTHO05D009130 1.1e-17 93.2 100 52.0
BcaB03g13427 Brassica carinata HOM05D007190 ORTHO05D009130 1.4e-17 92.8 94 53.2
THA.LOC104800864 Tarenaya hassleriana HOM05D007190 ORTHO05D009130 1.9e-17 92.4 93 53.8
C08p02440 Brassica napus HOM05D007190 ORTHO05D009130 2.5e-17 92.0 93 53.8
Lalb_Chr14g0367371 Lupinus albus HOM05D007190 ORTHO05D009130 7.2e-17 90.5 78 60.3
Sp1g05050 Schrenkiella parvula HOM05D007190 ORTHO05D009130 9.3e-17 90.1 93 52.7
AL1G16230 Arabidopsis lyrata HOM05D007190 ORTHO05D009130 1.6e-16 89.4 93 53.8
AT1G06240 Arabidopsis thaliana HOM05D007190 ORTHO05D009130 1.6e-16 89.4 93 53.8
unitig_744.g24492 Utricularia gibba HOM05D007190 ORTHO05D009130 1.6e-16 89.4 86 55.8
TWI14G0656 Tripterygium wilfordii HOM05D007190 ORTHO05D009130 2.1e-16 89.0 92 55.4
A08p36070 Brassica napus HOM05D007190 ORTHO05D009130 6.1e-16 87.4 92 52.2
Carub.0001s0560 Capsella rubella HOM05D007190 ORTHO05D009130 6.1e-16 87.4 93 52.7
Dinv03920 Davidia involucrata HOM05D007190 ORTHO05D009130 7.9e-16 87.0 69 65.2
Nitab4.5_0007774g0060 Nicotiana tabacum HOM05D007190 ORTHO05D009130 7.9e-16 87.0 73 54.8
Ciclev10015689m.g Citrus clementina HOM05D007190 ORTHO05D009130 4.3e-14 81.3 79 53.2
SGA_v2.0_scaffold9G04917 Striga asiatica HOM05D007190 ORTHO05D009130 4.3e-14 81.3 74 59.5
EL10Ac9g20877 Beta vulgaris HOM05D007190 ORTHO05D009130 7.4e-14 80.5 68 60.3
Nitab4.5_0003291g0030 Nicotiana tabacum HOM05D007190 ORTHO05D009130 1.7e-13 79.3 68 55.9
AUR62042313 Chenopodium quinoa HOM05D007190 ORTHO05D009130 4.8e-13 77.8 68 57.4
CsaV3_6G037600 Cucumis sativus L. HOM05D007190 ORTHO05D009130 4.8e-13 77.8 73 57.5
Lj1A689G21 Lonicera japonica HOM05D007190 ORTHO05D009130 9.1e-12 73.6 51 70.6
Sc21g0003800 Simmondsia chinensis HOM05D007190 ORTHO05D009130 2.2e-10 68.9 52 63.5
Glyma.13G292102 Glycine max HOM05D007190 ORTHO05D009130 2.5e-09 65.5 51 60.8
Zm00001eb199640 Zea mays HOM05D007190 ORTHO05D009130 4.2e-09 64.7 86 45.3
Haze_13342 Corylus avellana HOM05D007190 ORTHO05D009130 6.1e-08 60.8 48 64.6
Solyc10g049900.1 Solanum lycopersicum HOM05D007190 ORTHO05D009130 1.8e-07 59.3 69 46.4
SMO340G0318 Selaginella moellendorffii HOM05D007190 ORTHO05D009130 3.3e-06 55.1 78 37.2


User provided reference genes

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