Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047416 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 8.0e-26 119.8 66 100.0
Rhsim01G0035100 Rhododendron simsii HOM05D000759 ORTHO05D000574 6.8e-17 90.1 64 73.4
Actinidia04292 Actinidia chinensis HOM05D000759 ORTHO05D000574 1.7e-15 85.5 64 75.0
Oeu021277.1 Olea europaea HOM05D000759 ORTHO05D000574 4.5e-13 77.4 64 64.1
Actinidia25396 Actinidia chinensis HOM05D000759 ORTHO05D000574 2.9e-12 74.7 56 73.2
Dinv42866 Davidia involucrata HOM05D000759 ORTHO05D000574 3.9e-12 74.3 61 63.9
Dinv43234 Davidia involucrata HOM05D000759 ORTHO05D000574 3.9e-12 74.3 61 63.9
TAR636G1349 Trochodendron aralioides HOM05D000759 ORTHO05D000574 3.9e-12 74.3 61 60.7
Duzib168G1284 Durio zibethinus HOM05D000759 ORTHO05D000574 6.6e-12 73.6 61 62.3
TAR625G0313 Trochodendron aralioides HOM05D000759 ORTHO05D000574 1.9e-11 72.0 61 60.7
CANSAT64G1052 Cannabis sativa HOM05D000759 ORTHO05D000574 2.5e-11 71.6 61 57.4
ATR0739G179 Amborella trichopoda HOM05D000759 ORTHO05D000574 3.3e-11 71.2 61 57.4
GSVIVG01035957001 Vitis vinifera HOM05D000759 ORTHO05D000574 3.3e-11 71.2 63 58.7
Cc06_g15130 Coffea canephora HOM05D000759 ORTHO05D000574 5.6e-11 70.5 61 57.4
VMungo0647G1405 Vigna mungo HOM05D000759 ORTHO05D000574 7.3e-11 70.1 61 55.7
Atru.chr7.2543 Acer truncatum HOM05D000759 ORTHO05D000574 9.5e-11 69.7 61 57.4
Glyma.17G222567 Glycine max HOM05D000759 ORTHO05D000574 9.5e-11 69.7 61 59.0
Manes.16G129100 Manihot esculenta HOM05D000759 ORTHO05D000574 9.5e-11 69.7 54 64.8
Gohir.D05G061366 Gossypium hirsutum HOM05D000759 ORTHO05D000574 1.2e-10 69.3 54 64.8
Gorai.009G062500 Gossypium raimondii HOM05D000759 ORTHO05D000574 1.2e-10 69.3 54 64.8
Phvul.001G042000 Phaseolus vulgaris HOM05D000759 ORTHO05D000574 1.2e-10 69.3 61 55.7
Thecc.09G031900 Theobroma cacao HOM05D000759 ORTHO05D000574 2.1e-10 68.6 61 63.9
Duzib150G0452 Durio zibethinus HOM05D000759 ORTHO05D000574 3.6e-10 67.8 60 63.3
CiPaw.08G006300 Carya illinoinensis HOM05D000759 ORTHO05D000574 6.1e-10 67.0 61 57.4
Ciclev10007257m.g Citrus clementina HOM05D000759 ORTHO05D000574 6.1e-10 67.0 61 60.7
SalBow1G0677 Salvia bowleyana HOM05D000759 ORTHO05D000574 6.1e-10 67.0 64 62.5
CSS0048297 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 8.0e-10 66.6 51 66.7
Potri.006G263700 Populus trichocarpa HOM05D000759 ORTHO05D000574 8.0e-10 66.6 61 62.3
TPR.G38847 Trifolium pratense HOM05D000759 ORTHO05D000574 8.0e-10 66.6 63 60.3
arahy.Tifrunner.gnm1.ann1.C850Y8 Arachis hypogaea HOM05D000759 ORTHO05D000574 1.0e-09 66.2 61 59.0
EL10Ac2g04115 Beta vulgaris HOM05D000759 ORTHO05D000574 1.0e-09 66.2 53 66.0
Cfa013063 Carpinus fangiana HOM05D000759 ORTHO05D000574 1.0e-09 66.2 54 61.1
AUR62031605 Chenopodium quinoa HOM05D000759 ORTHO05D000574 1.4e-09 65.9 56 58.9
Haze_21423 Corylus avellana HOM05D000759 ORTHO05D000574 1.4e-09 65.9 54 61.1
Lj9A716G45 Lonicera japonica HOM05D000759 ORTHO05D000574 1.8e-09 65.5 65 61.5
MD15G1039700 Malus domestica HOM05D000759 ORTHO05D000574 1.8e-09 65.5 62 58.1
COL.COLO4_18945 Corchorus olitorius HOM05D000759 ORTHO05D000574 2.3e-09 65.1 62 61.3
DCAR_017905 Daucus carota HOM05D000759 ORTHO05D000574 2.3e-09 65.1 52 65.4
Sabra18G0022000 Salix brachista HOM05D000759 ORTHO05D000574 2.3e-09 65.1 62 62.9
Nn1g06027 Nelumbo nucifera HOM05D000759 ORTHO05D000574 3.1e-09 64.7 63 55.6
Thecc.09G016300 Theobroma cacao HOM05D000759 ORTHO05D000574 3.1e-09 64.7 61 60.7
arahy.Tifrunner.gnm1.ann1.IBG53V Arachis hypogaea HOM05D000759 ORTHO05D000574 4.0e-09 64.3 61 57.4
Duzib168G0448 Durio zibethinus HOM05D000759 ORTHO05D000574 4.0e-09 64.3 61 59.0
Lalb_Chr14g0361781 Lupinus albus HOM05D000759 ORTHO05D000574 4.0e-09 64.3 61 62.3
COL.COLO4_18795 Corchorus olitorius HOM05D000759 ORTHO05D000574 5.2e-09 63.9 61 59.0
QL02p018982 Quercus lobata HOM05D000759 ORTHO05D000574 5.2e-09 63.9 61 57.4
RcHm_v2.0_Chr6g0299461 Rosa chinensis HOM05D000759 ORTHO05D000574 5.2e-09 63.9 62 58.1
CiPaw.07G229700 Carya illinoinensis HOM05D000759 ORTHO05D000574 6.8e-09 63.5 61 52.5
Potri.018G019600 Populus trichocarpa HOM05D000759 ORTHO05D000574 6.8e-09 63.5 61 59.0
Gohir.A06G097000 Gossypium hirsutum HOM05D000759 ORTHO05D000574 8.9e-09 63.2 62 61.3
Prupe.1G393200 Prunus persica HOM05D000759 ORTHO05D000574 8.9e-09 63.2 61 57.4
CsaV3_4G036600 Cucumis sativus L. HOM05D000759 ORTHO05D000574 1.2e-08 62.8 60 58.3
FvH4_2g41080 Fragaria vesca HOM05D000759 ORTHO05D000574 1.2e-08 62.8 62 58.1
Lj5g0015952 Lotus japonicus HOM05D000759 ORTHO05D000574 1.2e-08 62.8 61 59.0
TWI63G0896 Tripterygium wilfordii HOM05D000759 ORTHO05D000574 1.2e-08 62.8 61 57.4
MSTRG.11766 Avicennia marina HOM05D000759 ORTHO05D000574 1.5e-08 62.4 51 62.7
Dinv40975 Davidia involucrata HOM05D000759 ORTHO05D000574 1.5e-08 62.4 86 44.2
Gorai.010G112600 Gossypium raimondii HOM05D000759 ORTHO05D000574 1.5e-08 62.4 62 61.3
Nn8g39868 Nelumbo nucifera HOM05D000759 ORTHO05D000574 1.5e-08 62.4 59 59.3
DCAR_014813 Daucus carota HOM05D000759 ORTHO05D000574 2.0e-08 62.0 52 61.5
Gohir.A05G059300 Gossypium hirsutum HOM05D000759 ORTHO05D000574 2.0e-08 62.0 50 62.0
MSTRG.6122 Avicennia marina HOM05D000759 ORTHO05D000574 4.4e-08 60.8 64 59.4
FAN15G3163 Fragaria x ananassa HOM05D000759 ORTHO05D000574 4.4e-08 60.8 62 56.5
FAN27G1460 Fragaria x ananassa HOM05D000759 ORTHO05D000574 4.4e-08 60.8 62 56.5
MD00G1143700 Malus domestica HOM05D000759 ORTHO05D000574 4.4e-08 60.8 59 57.6
Ah.14g078280 Amaranthus hybridus HOM05D000759 ORTHO05D000574 5.8e-08 60.5 41 68.3
Aqoxy2G00599 Aquilegia oxysepala HOM05D000759 ORTHO05D000574 5.8e-08 60.5 61 54.1
FAN20G1548 Fragaria x ananassa HOM05D000759 ORTHO05D000574 5.8e-08 60.5 62 56.5
HanXRQChr09g0244671 Helianthus annuus HOM05D000759 ORTHO05D000574 5.8e-08 60.5 66 56.1
PSO384G1069 Papaver somniferum HOM05D000759 ORTHO05D000574 5.8e-08 60.5 50 60.0
THA.LOC104803613 Tarenaya hassleriana HOM05D000759 ORTHO05D000574 5.8e-08 60.5 43 72.1
Atru.chr7.105 Acer truncatum HOM05D000759 ORTHO05D000574 7.5e-08 60.1 61 55.7
Actinidia10516 Actinidia chinensis HOM05D000759 ORTHO05D000574 7.5e-08 60.1 53 52.8
Aa31sc83G80 Aethionema arabicum HOM05D000759 ORTHO05D000574 7.5e-08 60.1 43 67.4
TWI34G0901 Tripterygium wilfordii HOM05D000759 ORTHO05D000574 7.5e-08 60.1 61 54.1
MELO3C016965.2 Cucumis melo HOM05D000759 ORTHO05D000574 9.8e-08 59.7 59 57.6
Gohir.D06G097600 Gossypium hirsutum HOM05D000759 ORTHO05D000574 9.8e-08 59.7 62 59.7
Psat6g026760 Pisum sativum HOM05D000759 ORTHO05D000574 9.8e-08 59.7 63 55.6
ClCG05G016340 Citrullus lanatus HOM05D000759 ORTHO05D000574 1.3e-07 59.3 58 55.2
Eucgr.B00549 Eucalyptus grandis HOM05D000759 ORTHO05D000574 1.3e-07 59.3 43 69.8
FAN26G2076 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.3e-07 59.3 59 62.7
Oeu032508.2 Olea europaea HOM05D000759 ORTHO05D000574 1.3e-07 59.3 47 66.0
MD15G1153000 Malus domestica HOM05D000759 ORTHO05D000574 1.7e-07 58.9 61 59.0
Sabra06G0206200 Salix brachista HOM05D000759 ORTHO05D000574 1.7e-07 58.9 59 57.6
SGA_v2.0_scaffold265G46120 Striga asiatica HOM05D000759 ORTHO05D000574 1.7e-07 58.9 64 56.2
HPP92_006061 Vanilla planifolia HOM05D000759 ORTHO05D000574 1.7e-07 58.9 61 55.7
Eucgr.C01939 Eucalyptus grandis HOM05D000759 ORTHO05D000574 2.2e-07 58.5 46 63.0
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 2.2e-07 58.5 59 59.3
Hund19564 Selenicereus undatus HOM05D000759 ORTHO05D000574 2.2e-07 58.5 60 55.0
Cfa020836 Carpinus fangiana HOM05D000759 ORTHO05D000574 2.9e-07 58.2 61 54.1
Ah.16g105040 Amaranthus hybridus HOM05D000759 ORTHO05D000574 3.7e-07 57.8 53 62.3
AUR62008469 Chenopodium quinoa HOM05D000759 ORTHO05D000574 3.7e-07 57.8 52 57.7
AUR62021624 Chenopodium quinoa HOM05D000759 ORTHO05D000574 3.7e-07 57.8 52 57.7
Cpa.g.sc127.28 Carica papaya HOM05D000759 ORTHO05D000574 4.9e-07 57.4 60 53.3
Prupe.7G261700 Prunus persica HOM05D000759 ORTHO05D000574 4.9e-07 57.4 61 59.0
FAN19G2320 Fragaria x ananassa HOM05D000759 ORTHO05D000574 6.4e-07 57.0 59 61.0
PSO063G2520 Papaver somniferum HOM05D000759 ORTHO05D000574 6.4e-07 57.0 54 53.7
PGR083G1826 Punica granatum HOM05D000759 ORTHO05D000574 6.4e-07 57.0 53 56.6
Sc18g0000010 Simmondsia chinensis HOM05D000759 ORTHO05D000574 6.4e-07 57.0 41 63.4
unitig_0.g771 Utricularia gibba HOM05D000759 ORTHO05D000574 6.4e-07 57.0 49 59.2
vmacro11246 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 6.4e-07 57.0 51 54.9
Thhalv10000020m.g Eutrema salsugineum HOM05D000759 ORTHO05D000574 8.3e-07 56.6 43 62.8
AL4G16180 Arabidopsis lyrata HOM05D000759 ORTHO05D000574 1.1e-06 56.2 50 56.0
AT2G25050 Arabidopsis thaliana HOM05D000759 ORTHO05D000574 1.1e-06 56.2 50 56.0
AT3G32400 Arabidopsis thaliana HOM05D000759 ORTHO05D000574 1.1e-06 56.2 50 56.0
ECA240G0233 Erigeron canadensis HOM05D000759 ORTHO05D000574 1.1e-06 56.2 64 48.4
Lj1g0002828 Lotus japonicus HOM05D000759 ORTHO05D000574 1.1e-06 56.2 56 57.1
Lalb_Chr24g0402011 Lupinus albus HOM05D000759 ORTHO05D000574 1.1e-06 56.2 57 50.9
RcHm_v2.0_Chr7g0182171 Rosa chinensis HOM05D000759 ORTHO05D000574 1.1e-06 56.2 43 65.1
Sp4g04040 Schrenkiella parvula HOM05D000759 ORTHO05D000574 1.1e-06 56.2 50 56.0
Sc09g0010610 Simmondsia chinensis HOM05D000759 ORTHO05D000574 1.1e-06 56.2 43 65.1
Carub.0004s0463 Capsella rubella HOM05D000759 ORTHO05D000574 1.4e-06 55.8 50 56.0
FvH4_1g01040 Fragaria vesca HOM05D000759 ORTHO05D000574 1.4e-06 55.8 59 59.3
FAN28G0669 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.4e-06 55.8 59 59.3
HanXRQChr09g0270941 Helianthus annuus HOM05D000759 ORTHO05D000574 1.4e-06 55.8 43 62.8
Hma1.2p1_1210F.1_g267210 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 1.4e-06 55.8 42 66.7
Hma1.2p1_1210F.1_g267220 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 1.4e-06 55.8 42 66.7
Hma1.2p1_1284F.1_g272865 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 1.4e-06 55.8 42 66.7
Os07g0596300 Oryza sativa ssp. japonica HOM05D000759 ORTHO05D000574 1.4e-06 55.8 50 60.0
PGR102G2457 Punica granatum HOM05D000759 ORTHO05D000574 1.4e-06 55.8 61 49.2
Rhsim02G0213600 Rhododendron simsii HOM05D000759 ORTHO05D000574 1.4e-06 55.8 49 57.1
SGA_v2.0_scaffold34G13680 Striga asiatica HOM05D000759 ORTHO05D000574 1.4e-06 55.8 64 54.7
EL10Ac2g03145 Beta vulgaris HOM05D000759 ORTHO05D000574 1.9e-06 55.5 51 56.9
CANSAT80G2314 Cannabis sativa HOM05D000759 ORTHO05D000574 1.9e-06 55.5 43 60.5
FAN23G2264 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.9e-06 55.5 53 64.2
Lj5C107G10 Lonicera japonica HOM05D000759 ORTHO05D000574 1.9e-06 55.5 45 60.0
SGA_v2.0_scaffold313G48323 Striga asiatica HOM05D000759 ORTHO05D000574 1.9e-06 55.5 43 62.8
VMungo1215G1917 Vigna mungo HOM05D000759 ORTHO05D000574 1.9e-06 55.5 43 60.5
FvH4_5g14490 Fragaria vesca HOM05D000759 ORTHO05D000574 2.4e-06 55.1 43 62.8
FAN13G0011 Fragaria x ananassa HOM05D000759 ORTHO05D000574 2.4e-06 55.1 43 62.8
HanXRQChr10g0313731 Helianthus annuus HOM05D000759 ORTHO05D000574 2.4e-06 55.1 55 50.9
RcHm_v2.0_Chr2g0085801 Rosa chinensis HOM05D000759 ORTHO05D000574 2.4e-06 55.1 59 59.3
Aqoxy3G03507 Aquilegia oxysepala HOM05D000759 ORTHO05D000574 3.2e-06 54.7 53 54.7
Cfa019279 Carpinus fangiana HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 60.5
CiPaw.12G011600 Carya illinoinensis HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 60.5
Cc04_g14340 Coffea canephora HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 62.8
Haze_07655 Corylus avellana HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 60.5
DCAR_016584 Daucus carota HOM05D000759 ORTHO05D000574 3.2e-06 54.7 41 63.4
ECA234G3418 Erigeron canadensis HOM05D000759 ORTHO05D000574 3.2e-06 54.7 64 51.6
Lsat_1_v5_gn_7_49641 Lactuca sativa HOM05D000759 ORTHO05D000574 3.2e-06 54.7 52 53.8
Medtr1g013800 Medicago truncatula HOM05D000759 ORTHO05D000574 3.2e-06 54.7 61 47.5
Nn3g17346 Nelumbo nucifera HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 62.8
Rhsim08G0150800 Rhododendron simsii HOM05D000759 ORTHO05D000574 3.2e-06 54.7 43 60.5
BcaC07g40895 Brassica carinata HOM05D000759 ORTHO05D000574 4.1e-06 54.3 50 52.0
Lj7A733G45 Lonicera japonica HOM05D000759 ORTHO05D000574 4.1e-06 54.3 37 62.2
Phvul.003G187800 Phaseolus vulgaris HOM05D000759 ORTHO05D000574 4.1e-06 54.3 43 58.1
QL10p017923 Quercus lobata HOM05D000759 ORTHO05D000574 4.1e-06 54.3 43 58.1
Actinidia37606 Actinidia chinensis HOM05D000759 ORTHO05D000574 5.4e-06 53.9 41 63.4
arahy.Tifrunner.gnm1.ann1.6R56IB Arachis hypogaea HOM05D000759 ORTHO05D000574 5.4e-06 53.9 55 52.7
arahy.Tifrunner.gnm1.ann1.PTH5J3 Arachis hypogaea HOM05D000759 ORTHO05D000574 5.4e-06 53.9 55 52.7
MSTRG.22997 Avicennia marina HOM05D000759 ORTHO05D000574 5.4e-06 53.9 43 60.5
A09p55950 Brassica napus HOM05D000759 ORTHO05D000574 5.4e-06 53.9 43 58.1
BraA09t40996Z Brassica rapa HOM05D000759 ORTHO05D000574 5.4e-06 53.9 43 58.1
CSS0004879 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 5.4e-06 53.9 43 62.8
Gorai.008G195600 Gossypium raimondii HOM05D000759 ORTHO05D000574 5.4e-06 53.9 51 56.9
Sed0004730 Sechium edule HOM05D000759 ORTHO05D000574 5.4e-06 53.9 51 54.9
SGA_v2.0_scaffold25G10937 Striga asiatica HOM05D000759 ORTHO05D000574 5.4e-06 53.9 43 60.5
BcaB08g35140 Brassica carinata HOM05D000759 ORTHO05D000574 7.0e-06 53.5 43 58.1
CARHR116660 Cardamine hirsuta HOM05D000759 ORTHO05D000574 7.0e-06 53.5 50 54.0
Ca_13071_v3 Cicer arietinum L. HOM05D000759 ORTHO05D000574 7.0e-06 53.5 62 56.5
DCAR_021515 Daucus carota HOM05D000759 ORTHO05D000574 7.0e-06 53.5 43 60.5
Dinv10662 Davidia involucrata HOM05D000759 ORTHO05D000574 7.0e-06 53.5 43 60.5
Gohir.A12G179700 Gossypium hirsutum HOM05D000759 ORTHO05D000574 7.0e-06 53.5 51 56.9
Gohir.D12G182300 Gossypium hirsutum HOM05D000759 ORTHO05D000574 7.0e-06 53.5 51 56.9
HanXRQChr05g0148691 Helianthus annuus HOM05D000759 ORTHO05D000574 7.0e-06 53.5 43 60.5
Lsat_1_v5_gn_5_91720 Lactuca sativa HOM05D000759 ORTHO05D000574 7.0e-06 53.5 64 50.0
Medtr4g109040 Medicago truncatula HOM05D000759 ORTHO05D000574 7.0e-06 53.5 50 58.0
CSS0013752 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 9.2e-06 53.1 43 60.5
Sed0007572 Sechium edule HOM05D000759 ORTHO05D000574 9.2e-06 53.1 61 52.5
THA.LOC104813268 Tarenaya hassleriana HOM05D000759 ORTHO05D000574 9.2e-06 53.1 57 52.6
vmacro17576 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 9.2e-06 53.1 43 60.5


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