Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.5e-59 231.5 121 100.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.8e-42 174.9 108 84.3
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.9e-41 172.6 108 81.5
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 2.5e-41 172.2 108 83.3
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.8e-40 168.7 108 77.8
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.5e-38 162.9 108 76.9
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.4e-38 161.4 108 76.9
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 7.5e-38 160.6 108 77.8
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.2e-37 159.1 108 78.7
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.8e-37 158.7 108 75.9
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 4.9e-37 157.9 108 76.9
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.9e-37 157.9 108 75.9
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 4.9e-37 157.9 108 76.9
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 1.1e-36 156.8 108 73.1
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.8e-36 156.0 108 75.9
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.8e-36 156.0 106 75.5
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.4e-36 155.6 108 75.0
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 2.4e-36 155.6 108 74.1
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 2.4e-36 155.6 106 74.5
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 2.4e-36 155.6 108 72.2
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 4.1e-36 154.8 110 75.5
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 4.1e-36 154.8 108 74.1
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 5.4e-36 154.5 108 73.1
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 5.4e-36 154.5 108 72.2
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 5.4e-36 154.5 109 77.1
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.6e-35 152.9 106 78.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 2.9e-34 148.7 108 73.1
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 3.8e-34 148.3 108 75.0
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 6.6e-34 147.5 108 71.3
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 8.6e-34 147.1 108 74.1
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.1e-33 146.7 109 72.5
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.1e-33 146.7 109 72.5
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.1e-33 146.7 110 72.7
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.1e-33 146.7 108 73.1
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.9e-33 146.0 108 70.4
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 2.5e-33 145.6 108 71.3
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 3.3e-33 145.2 108 71.3
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 3.3e-33 145.2 108 73.1
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.3e-33 144.8 108 72.2
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 4.3e-33 144.8 108 71.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 7.3e-33 144.1 108 72.2
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 9.5e-33 143.7 108 72.2
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 9.5e-33 143.7 108 73.1
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.2e-32 143.3 109 67.9
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 1.6e-32 142.9 108 72.2
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.6e-32 142.9 108 72.2
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.6e-32 142.9 108 72.2
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.6e-32 142.9 110 67.3
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.1e-32 142.5 106 69.8
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 2.1e-32 142.5 108 73.1
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 2.8e-32 142.1 108 71.3
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.8e-32 142.1 108 67.6
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 3.6e-32 141.7 108 68.5
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 3.6e-32 141.7 108 68.5
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 4.7e-32 141.4 107 70.1
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 4.7e-32 141.4 111 72.1
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.7e-32 141.4 108 70.4
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 6.1e-32 141.0 105 70.5
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 8.0e-32 140.6 108 69.4
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 8.0e-32 140.6 108 69.4
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.0e-31 140.2 108 68.5
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 1.4e-31 139.8 119 66.4
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.8e-31 139.4 106 69.8
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.8e-31 139.4 110 70.9
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 2.3e-31 139.0 109 69.7
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 4.0e-31 138.3 109 66.1
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 5.2e-31 137.9 109 63.3
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 6.8e-31 137.5 106 66.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.2e-30 136.7 108 69.4
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 3.4e-30 135.2 106 70.8
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 4.4e-30 134.8 106 69.8
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 4.4e-30 134.8 106 65.1
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 9.8e-30 133.7 123 62.6
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 9.8e-30 133.7 108 68.5
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.9e-29 132.1 118 64.4
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.9e-29 132.1 102 64.7
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 2.9e-29 132.1 110 65.5
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 3.7e-29 131.7 108 68.5
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.4e-28 129.8 112 62.5
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.8e-28 129.4 110 67.3
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.4e-28 129.0 108 67.6
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 3.2e-28 128.6 112 63.4
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 3.2e-28 128.6 101 68.3
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.2e-28 128.6 110 67.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 4.1e-28 128.3 122 59.0
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.4e-28 127.9 108 64.8
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.4e-28 127.9 113 65.5
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.4e-28 127.9 110 61.8
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 7.0e-28 127.5 119 59.7
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.2e-27 126.7 107 67.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.2e-27 126.7 107 67.3
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.6e-27 126.3 99 65.7
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 2.0e-27 125.9 119 60.5
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.5e-27 125.2 132 55.3
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.5e-27 125.2 115 64.3
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.3e-26 122.5 95 69.5
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 3.0e-26 122.1 119 63.0
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 8.6e-26 120.6 109 62.4
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 8.6e-26 120.6 70 85.7
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 8.6e-26 120.6 90 72.2
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.2e-24 116.7 71 80.3
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 8.0e-24 114.0 108 57.4
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 4.4e-22 108.2 60 90.0
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.1e-20 103.6 59 84.7
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 4.1e-20 101.7 59 83.1
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.1e-20 101.7 59 86.4
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.1e-20 101.7 59 86.4
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 4.1e-20 101.7 58 87.9
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 3.5e-19 98.6 100 52.0
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 6.0e-19 97.8 59 84.7
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 7.8e-19 97.4 158 38.0
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 8.6e-18 94.0 71 62.0
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 8.6e-18 94.0 81 51.9
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 2.8e-16 89.0 105 47.6
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.2e-14 83.6 129 45.7
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.4e-12 76.6 58 56.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 3.3e-09 65.5 119 33.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.1e-08 62.8 69 49.3
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 4.7e-08 61.6 101 37.6


User provided reference genes

Program Settings