Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.2e-79 299.7 138 100.0
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 3.3e-66 255.0 117 100.0
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.2e-61 238.0 121 90.1
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 4.7e-60 234.6 117 89.7
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.7e-60 234.6 117 91.5
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 1.0e-59 233.4 121 88.4
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 3.0e-59 231.9 117 89.7
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 6.7e-59 230.7 116 91.4
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 2.2e-57 225.7 117 83.8
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 8.2e-57 223.8 126 78.6
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 5.9e-55 217.6 121 77.7
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 7.7e-55 217.2 121 81.0
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.0e-54 216.9 116 80.2
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 1.3e-54 216.5 121 78.5
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.2e-54 215.7 117 80.3
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.2e-54 215.7 117 79.5
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 2.9e-54 215.3 116 79.3
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 2.9e-54 215.3 121 79.3
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 5.0e-54 214.5 121 77.7
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 6.5e-54 214.2 117 79.5
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 2.5e-53 212.2 117 82.1
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 2.5e-53 212.2 129 72.9
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 4.2e-53 211.5 117 77.8
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 5.5e-53 211.1 116 78.4
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 9.4e-53 210.3 120 76.7
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 1.6e-52 209.5 116 77.6
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 2.1e-52 209.1 120 73.3
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 2.1e-52 209.1 121 74.4
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 2.7e-52 208.8 117 77.8
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 4.7e-52 208.0 116 75.0
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 8.0e-52 207.2 118 74.6
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 8.0e-52 207.2 121 71.9
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.8e-51 206.1 125 71.2
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 1.8e-51 206.1 117 77.8
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 2.3e-51 205.7 117 76.9
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 2.3e-51 205.7 121 75.2
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 3.0e-51 205.3 120 73.3
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 3.0e-51 205.3 116 75.0
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 3.0e-51 205.3 120 73.3
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 3.9e-51 204.9 117 76.9
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 3.9e-51 204.9 120 73.3
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 5.2e-51 204.5 116 74.1
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 6.7e-51 204.1 117 76.9
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 8.8e-51 203.8 116 74.1
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 8.8e-51 203.8 121 71.9
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 1.1e-50 203.4 121 73.6
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 2.0e-50 202.6 120 72.5
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 3.3e-50 201.8 121 75.2
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 4.4e-50 201.4 125 69.6
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 4.4e-50 201.4 117 77.8
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.4e-50 201.4 117 77.8
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 4.4e-50 201.4 117 76.1
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 4.4e-50 201.4 121 71.1
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 5.7e-50 201.1 117 77.8
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 9.7e-50 200.3 121 69.4
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 9.7e-50 200.3 117 75.2
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 1.7e-49 199.5 124 66.9
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 3.7e-49 198.4 117 76.9
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.8e-49 198.0 115 77.4
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 4.8e-49 198.0 120 70.0
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 4.8e-49 198.0 114 73.7
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 6.3e-49 197.6 129 67.4
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 8.2e-49 197.2 120 71.7
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 1.2e-47 193.4 125 65.6
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 2.0e-47 192.6 113 72.6
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 5.9e-47 191.0 113 72.6
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 7.7e-47 190.7 114 71.9
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 1.3e-46 189.9 118 72.0
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 2.9e-46 188.7 115 72.2
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 6.5e-46 187.6 114 71.1
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 6.5e-46 187.6 115 71.3
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.5e-45 185.7 115 71.3
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 7.2e-45 184.1 122 70.5
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.2e-44 183.3 119 67.2
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.6e-44 183.0 119 67.2
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 1.6e-44 183.0 118 71.2
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 4.7e-44 181.4 119 68.1
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 8.0e-44 180.6 119 66.4
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 8.0e-44 180.6 115 69.6
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 1.0e-43 180.3 119 66.4
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.4e-43 179.9 119 66.4
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 1.8e-43 179.5 119 66.4
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.8e-43 179.5 119 66.4
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 1.8e-43 179.5 119 66.4
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 1.8e-43 179.5 119 66.4
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 1.8e-43 179.5 119 66.4
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.3e-43 179.1 121 66.1
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.3e-43 179.1 119 64.7
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 3.0e-43 178.7 119 65.5
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 3.0e-43 178.7 115 67.8
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 5.2e-43 177.9 117 70.9
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 6.8e-43 177.6 119 67.2
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 6.8e-43 177.6 114 64.0
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.5e-42 176.4 114 63.2
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 2.0e-42 176.0 115 65.2
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 2.0e-42 176.0 128 57.8
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 2.6e-42 175.6 113 69.0
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 4.4e-42 174.9 119 65.5
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 2.2e-41 172.6 115 69.6
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 6.3e-41 171.0 114 61.4
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 7.0e-40 167.5 120 63.3
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 2.0e-39 166.0 114 58.8
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 5.9e-39 164.5 113 64.6
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 3.8e-38 161.8 114 63.2
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.5e-37 159.1 103 69.9
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 1.8e-35 152.9 114 58.8
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 5.2e-35 151.4 128 52.3
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 6.3e-33 144.4 119 54.6
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.1e-32 143.7 113 54.0
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 7.0e-32 141.0 98 65.3
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.7e-31 139.0 115 51.3
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 4.7e-28 128.3 114 47.4
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.4e-26 122.1 70 82.9
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 1.4e-19 100.1 78 56.4


User provided reference genes

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