Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 6.4e-55 217.2 115 100.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.5e-27 126.3 87 74.7
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 3.7e-26 121.7 87 74.7
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.1e-25 120.2 89 75.3
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 1.4e-25 119.8 88 69.3
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 5.3e-25 117.9 88 67.0
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 9.0e-25 117.1 95 61.1
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 9.0e-25 117.1 105 60.0
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 2.0e-24 115.9 84 69.0
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 2.6e-24 115.5 84 69.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.6e-24 115.5 93 61.3
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 3.4e-24 115.2 84 69.0
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 4.5e-24 114.8 84 67.9
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 4.5e-24 114.8 84 67.9
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 1.7e-23 112.8 84 66.7
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 2.9e-23 112.1 90 62.2
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 2.9e-23 112.1 87 63.2
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 3.8e-23 111.7 88 64.8
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 5.0e-23 111.3 84 65.5
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 6.5e-23 110.9 84 64.3
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 8.4e-23 110.5 89 62.9
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 1.1e-22 110.2 85 64.7
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 1.1e-22 110.2 88 65.9
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-22 109.8 85 63.5
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-22 109.8 84 64.3
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 1.4e-22 109.8 84 64.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 1.4e-22 109.8 90 61.1
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.5e-22 109.0 85 63.5
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 5.5e-22 107.8 88 62.5
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 7.2e-22 107.5 87 60.9
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 7.2e-22 107.5 86 61.6
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 1.2e-21 106.7 84 61.9
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.2e-21 106.7 91 59.3
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.6e-21 106.3 89 59.6
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 2.1e-21 105.9 89 62.9
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 1.0e-20 103.6 83 60.2
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.3e-20 103.2 98 54.1
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.8e-20 102.8 81 60.5
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 2.3e-20 102.4 81 61.7
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 3.0e-20 102.1 96 54.2
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 3.0e-20 102.1 94 55.3
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 3.9e-20 101.7 82 62.2
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 8.7e-20 100.5 86 58.1
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 1.1e-19 100.1 84 63.1
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 1.1e-19 100.1 84 59.5
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 1.1e-19 100.1 90 56.7
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 2.5e-19 99.0 90 54.4
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 2.5e-19 99.0 101 49.5
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 3.3e-19 98.6 84 57.1
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 4.3e-19 98.2 87 54.0
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 4.3e-19 98.2 87 55.2
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 4.3e-19 98.2 87 55.2
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 5.7e-19 97.8 87 56.3
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 7.4e-19 97.4 93 54.8
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 1.3e-18 96.7 87 54.0
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.3e-18 96.7 87 54.0
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.3e-18 96.7 90 52.2
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 1.6e-18 96.3 77 62.3
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.6e-18 96.3 80 57.5
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 1.6e-18 96.3 74 62.2
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 1.6e-18 96.3 74 62.2
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 1.6e-18 96.3 99 49.5
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.6e-18 96.3 86 54.7
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 6.3e-18 94.4 90 55.6
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 8.2e-18 94.0 86 54.7
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.1e-17 93.6 80 56.2
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 1.1e-17 93.6 81 61.7
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.4e-17 93.2 81 55.6
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.8e-17 92.8 79 58.2
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.1e-17 92.0 87 51.7
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 4.1e-17 91.7 85 51.8
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 4.1e-17 91.7 80 52.5
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 4.1e-17 91.7 77 53.2
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 5.3e-17 91.3 85 52.9
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 9.0e-17 90.5 71 57.7
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 9.0e-17 90.5 80 50.0
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.2e-16 90.1 84 54.8
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.5e-16 89.7 79 51.9
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 3.4e-16 88.6 80 50.0
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 4.5e-16 88.2 78 52.6
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 7.7e-16 87.4 80 50.0
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.3e-15 86.7 86 48.8
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.9e-15 85.5 80 57.5
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 2.9e-15 85.5 86 51.2
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 3.8e-15 85.1 82 43.9
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 3.8e-15 85.1 87 48.3
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 5.0e-15 84.7 87 48.3
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 5.0e-15 84.7 80 51.2
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 6.5e-15 84.3 77 50.6
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 6.5e-15 84.3 94 48.9
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 8.5e-15 84.0 65 64.6
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 1.1e-14 83.6 98 44.9
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 1.4e-14 83.2 87 47.1
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 1.9e-14 82.8 63 58.7
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.9e-14 82.8 93 47.3
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 3.2e-14 82.0 85 48.2
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 3.2e-14 82.0 95 45.3
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 4.2e-14 81.6 95 46.3
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 7.2e-14 80.9 79 46.8
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 9.4e-14 80.5 82 46.3
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 9.4e-14 80.5 77 49.4
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 1.2e-13 80.1 84 46.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 2.7e-13 79.0 51 72.5
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.6e-13 78.6 84 47.6
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 4.6e-13 78.2 79 49.4
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 6.1e-13 77.8 81 51.9
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 2.3e-12 75.9 99 42.4
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.3e-12 75.9 94 42.6
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 3.3e-11 72.0 79 46.8
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 4.3e-11 71.6 79 49.4
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.7e-10 68.6 53 56.6
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.7e-10 68.6 53 56.6
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 2.4e-09 65.9 53 64.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.3e-07 60.1 79 40.5
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 2.9e-07 58.9 86 37.2
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 6.5e-07 57.8 78 37.2
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-06 56.6 48 58.3
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 1.4e-06 56.6 48 58.3
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 1.4e-06 56.6 76 42.1


User provided reference genes

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