Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.2e-225 786.2 397 100.0
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.0e-224 783.1 397 99.7
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.1e-157 558.9 397 74.8
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 7.2e-138 494.6 301 80.7
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 8.5e-131 471.1 424 63.0
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 1.0e-128 464.2 336 68.8
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.4e-128 463.8 396 65.2
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 1.4e-128 463.8 398 62.8
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 5.2e-128 461.8 382 63.9
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.3e-127 459.1 393 64.6
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 7.0e-125 451.4 398 61.3
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 5.9e-124 448.4 396 62.4
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 1.7e-123 446.8 378 61.1
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 1.5e-122 443.7 357 62.7
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.9e-122 443.4 390 62.8
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 2.5e-122 443.0 404 59.2
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 3.2e-122 442.6 385 62.9
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 9.4e-122 441.0 401 60.3
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 2.7e-121 439.5 396 62.1
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 8.0e-121 438.0 398 60.6
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 1.0e-120 437.6 407 61.2
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.4e-120 437.2 370 60.8
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.5e-119 433.7 383 61.1
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 7.5e-119 431.4 384 61.7
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 1.3e-118 430.6 387 58.4
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.2e-118 429.9 428 57.5
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.3e-118 428.3 370 60.3
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.4e-117 427.2 326 66.9
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 4.5e-116 422.2 388 59.3
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.7e-115 420.2 392 56.6
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 2.2e-115 419.9 395 58.0
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 2.9e-115 419.5 404 55.9
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.9e-115 419.5 395 57.7
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 5.0e-115 418.7 397 58.2
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 1.1e-114 417.5 395 56.5
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.5e-114 417.2 395 56.7
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 5.5e-114 415.2 387 58.4
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 5.5e-114 415.2 391 57.0
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 7.2e-114 414.8 309 67.6
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 9.4e-114 414.5 396 56.8
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 2.1e-113 413.3 394 55.6
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 2.7e-113 412.9 309 67.0
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.4e-112 410.6 395 58.7
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.8e-112 410.2 390 56.9
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.3e-112 409.8 382 56.0
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.8e-109 400.2 393 56.2
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 4.1e-109 399.1 341 60.7
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 9.1e-109 397.9 355 58.6
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-107 394.0 294 65.6
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.7e-107 393.7 394 55.8
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 5.0e-107 392.1 373 57.4
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 3.3e-106 389.4 383 55.1
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 3.3e-106 389.4 386 55.2
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.6e-105 387.1 334 60.5
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 2.1e-105 386.7 373 56.8
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-105 386.7 387 55.8
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.6e-105 386.0 340 60.9
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 3.6e-105 386.0 351 57.3
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 4.7e-105 385.6 317 59.6
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 4.7e-105 385.6 317 59.6
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.0e-104 384.4 394 55.1
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.0e-104 384.4 397 52.6
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 6.8e-104 381.7 344 56.1
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 7.5e-103 378.3 389 54.5
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.3e-102 377.5 399 53.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.7e-102 377.1 396 52.5
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 3.7e-102 375.9 293 65.2
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 3.7e-102 375.9 378 54.8
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 4.9e-102 375.6 398 50.8
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 8.3e-102 374.8 390 53.3
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 8.3e-102 374.8 357 56.6
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 8.3e-102 374.8 360 55.8
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 1.4e-101 374.0 396 52.8
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 2.4e-101 373.2 396 52.3
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 7.0e-101 371.7 363 56.7
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.0e-100 370.2 415 49.4
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.9e-100 368.6 393 51.7
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.3e-99 367.5 395 52.2
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.7e-99 367.1 373 54.2
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 2.3e-99 366.7 409 51.1
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 3.9e-99 365.9 411 50.9
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.6e-99 365.2 416 48.3
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 6.6e-99 365.2 391 52.4
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 1.9e-98 363.6 404 51.5
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 7.3e-98 361.7 280 63.9
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 8.9e-96 354.8 321 56.4
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.7e-94 350.5 323 57.9
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.4e-93 347.4 370 52.2
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.9e-93 347.1 382 50.0
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 3.5e-92 342.8 232 72.8
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 6.0e-92 342.0 378 50.8
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 6.6e-91 338.6 298 56.7
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 6.8e-88 328.6 353 49.6
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.4e-85 320.9 370 51.6
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.1e-84 317.0 237 64.6
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 4.1e-77 292.7 325 45.8
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.5e-74 284.3 191 77.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 9.6e-74 281.6 355 42.5
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 2.8e-73 280.0 177 81.4
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 8.9e-72 275.0 220 60.5
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 7.6e-71 271.9 246 55.7
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 4.3e-66 256.1 338 41.4
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.6e-60 237.7 252 54.0
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.3e-59 233.8 286 49.7
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 1.9e-50 204.1 180 56.1
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 4.2e-45 186.4 194 49.5
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.8e-43 181.0 322 36.0
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 5.1e-43 179.5 311 35.0
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 3.7e-41 173.3 183 50.8
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 9.0e-40 168.7 150 56.7
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-39 168.3 261 37.5
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.9e-38 163.7 238 34.9
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.0e-38 162.9 292 34.9
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.2e-37 160.2 250 36.4
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 9.3e-37 158.7 292 35.3
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-35 154.8 189 45.5
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.1e-35 152.9 283 35.3
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 2.5e-34 150.6 148 50.0
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 5.7e-34 149.4 303 32.7
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.8e-32 144.4 136 52.2
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 5.3e-32 142.9 144 50.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 3.2e-29 133.7 229 34.9
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.7e-25 121.3 194 40.2
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 7.7e-23 112.5 107 51.4
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.0e-18 97.8 239 28.5
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 6.5e-14 82.8 60 75.0
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 3.7e-09 67.0 141 39.0


User provided reference genes

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