Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047359 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 3.3e-93 345.5 244 100.0
CSS0024245 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.6e-84 316.6 244 93.4
CSS0013872 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.9e-64 250.0 232 73.3
CSS0038611 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 4.8e-60 235.3 235 56.6
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 6.2e-15 85.5 102 49.0
Rhsim03G0042400 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.3e-14 83.6 153 60.1
Hma1.2p1_1168F.1_g263080 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.2e-14 82.4 101 42.6
RhsimUnG0022400 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.2e-14 82.4 90 50.0
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.9e-12 76.6 102 43.1
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.1e-11 74.7 102 42.2
EL10Ac4g07889 Beta vulgaris HOM05D000009 ORTHO05D000008 3.2e-11 73.2 110 35.5
Hma1.2p1_1755F.1_g300990 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.1e-11 72.0 102 42.2
MD14G1072100 Malus domestica HOM05D000009 ORTHO05D000008 7.1e-11 72.0 97 41.2
Gohir.D03G053160 Gossypium hirsutum HOM05D000009 ORTHO05D000008 9.2e-11 71.6 97 44.3
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.2e-11 71.6 102 40.2
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 1.6e-10 70.9 110 34.5
CANSAT80G2800 Cannabis sativa HOM05D000009 ORTHO05D000008 4.6e-10 69.3 95 41.1
Gorai.003G056000 Gossypium raimondii HOM05D000009 ORTHO05D000008 6.0e-10 68.9 96 44.8
Hma1.2p1_0924F.1_g237170 Hydrangea macrophylla HOM05D000009 ORTHO05D036403 6.0e-10 68.9 102 41.2
Hma1.2p1_1755F.1_g301010 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.0e-10 68.9 102 41.2
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 1.0e-09 68.2 107 41.1
Hma1.2p1_1250F.1_g270280 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.0e-09 68.2 102 40.2
TPR.G18255 Trifolium pratense HOM05D000009 ORTHO05D000008 1.7e-09 67.4 116 37.9
Gohir.D03G053750 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.3e-09 67.0 96 44.8
Thecc.05G219400 Theobroma cacao HOM05D000009 ORTHO05D000008 3.9e-09 66.2 97 46.4
RcHm_v2.0_Chr2g0117271 Rosa chinensis HOM05D000009 ORTHO05D000008 8.6e-09 65.1 81 43.2
Hma1.2p1_0621F.1_g190830 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.5e-08 64.3 102 38.2
Hma1.2p1_1755F.1_g300950 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.5e-08 64.3 101 40.6
VMungo1383G0812 Vigna mungo HOM05D000009 ORTHO05D000008 1.5e-08 64.3 98 37.8
Prupe.6G243400 Prunus persica HOM05D000009 ORTHO05D000008 1.9e-08 63.9 89 38.2
Cc00_g11560 Coffea canephora HOM05D000009 ORTHO05D000008 3.3e-08 63.2 102 39.2
Glyma.19G135400 Glycine max HOM05D000009 ORTHO05D000008 3.3e-08 63.2 100 38.0
Phvul.001G132800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.3e-08 63.2 98 37.8
Phvul.001G132864 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.3e-08 63.2 98 37.8
FAN23G1263 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.3e-08 62.8 78 44.9
Phvul.007G254900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.3e-08 62.8 97 42.3
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 5.6e-08 62.4 109 36.7
QL07p029392 Quercus lobata HOM05D000009 ORTHO05D012472 5.6e-08 62.4 100 43.0
QL12p011837 Quercus lobata HOM05D000009 ORTHO05D000008 5.6e-08 62.4 83 39.8
Oeu023036.1 Olea europaea HOM05D000009 ORTHO05D000008 7.3e-08 62.0 87 41.4
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 7.3e-08 62.0 94 35.1
Phvul.007G254400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 7.3e-08 62.0 74 47.3
Atru.chr1.3962 Acer truncatum HOM05D000009 ORTHO05D000008 9.5e-08 61.6 76 42.1
FAN05G4722 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.5e-08 61.6 81 43.2
Hma1.2p1_0924F.1_g237270 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.5e-08 61.6 75 42.7
Lj5C461T2 Lonicera japonica HOM05D000009 ORTHO05D000008 1.2e-07 61.2 108 34.3
Thecc.05G220700 Theobroma cacao HOM05D000009 ORTHO05D000008 1.2e-07 61.2 108 39.8
Duzib128G1111 Durio zibethinus HOM05D000009 ORTHO05D000008 1.6e-07 60.8 98 44.9
Lj2A396T33 Lonicera japonica HOM05D000009 ORTHO05D003343 1.6e-07 60.8 105 40.0
Lj5C466G1 Lonicera japonica HOM05D000009 ORTHO05D000008 1.6e-07 60.8 108 34.3
Medtr6g052760 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-07 60.5 144 31.9
Thecc.05G220500 Theobroma cacao HOM05D000009 ORTHO05D000008 2.1e-07 60.5 108 38.9
RcHm_v2.0_Chr2g0117561 Rosa chinensis HOM05D000009 ORTHO05D000008 2.8e-07 60.1 96 37.5
FAN02G0737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-07 59.7 81 42.0
FAN09G3902 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-07 59.7 81 42.0
Phvul.001G132632 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.6e-07 59.7 111 34.2
TPR.G24032 Trifolium pratense HOM05D000009 ORTHO05D000008 3.6e-07 59.7 105 34.3
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 4.7e-07 59.3 90 34.4
Dinv43408 Davidia involucrata HOM05D000009 ORTHO05D000008 4.7e-07 59.3 108 41.7
Eucgr.E03806 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.7e-07 59.3 110 32.7
Hma1.2p1_1168F.1_g263100 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.7e-07 59.3 68 44.1
Medtr4g119195 Medicago truncatula HOM05D000009 ORTHO05D000008 4.7e-07 59.3 111 38.7
FvH4_6g51570 Fragaria vesca HOM05D000009 ORTHO05D000008 6.2e-07 58.9 83 39.8
Thecc.05G220900 Theobroma cacao HOM05D000009 ORTHO05D000008 6.2e-07 58.9 108 38.9
arahy.Tifrunner.gnm1.ann1.WRA2D9 Arachis hypogaea HOM05D000009 ORTHO05D000008 8.1e-07 58.5 104 36.5
Migut.A00566 Erythranthe guttata HOM05D000009 ORTHO05D000008 8.1e-07 58.5 96 34.4
Eucgr.K01864 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.1e-07 58.5 110 33.6
Nitab4.5_0000194g0240 Nicotiana tabacum HOM05D000009 ORTHO05D011077 8.1e-07 58.5 114 36.8
QL11p012087 Quercus lobata HOM05D000009 ORTHO05D000008 8.1e-07 58.5 71 45.1
TPR.G26700 Trifolium pratense HOM05D022962 ORTHO05D012472 8.1e-07 58.5 72 40.3
Duzib212G0006 Durio zibethinus HOM05D000009 ORTHO05D000008 1.1e-06 58.2 70 44.3
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 57.8 82 40.2
Phvul.002G129900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-06 57.8 83 41.0
PGR004G1496 Punica granatum HOM05D000009 ORTHO05D000008 1.4e-06 57.8 108 35.2
QL02p016325 Quercus lobata HOM05D000009 ORTHO05D000008 1.4e-06 57.8 76 46.1
TPR.G10308 Trifolium pratense HOM05D000009 ORTHO05D012472 1.4e-06 57.8 134 31.3
CANSAT80G0295 Cannabis sativa HOM05D000009 ORTHO05D000008 1.8e-06 57.4 72 44.4
CANSAT80G0508 Cannabis sativa HOM05D000009 ORTHO05D012834 1.8e-06 57.4 107 38.3
Lj5C663T4 Lonicera japonica HOM05D000009 ORTHO05D000008 1.8e-06 57.4 87 37.9
MD05G1243400 Malus domestica HOM05D000009 ORTHO05D000008 1.8e-06 57.4 89 36.0
Medtr6g052455 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.4 52 51.9
FAN05G3858 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 57.0 81 40.7
GSVIVG01032183001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.4e-06 57.0 104 36.5
CANSAT80G1269 Cannabis sativa HOM05D000009 ORTHO05D012834 3.1e-06 56.6 107 38.3
FvH4_6g51610 Fragaria vesca HOM05D000009 ORTHO05D000008 3.1e-06 56.6 78 41.0
Os02g0150600 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012472 3.1e-06 56.6 107 33.6
Phvul.002G131000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.1e-06 56.6 99 32.3
TPR.G34427 Trifolium pratense HOM05D000009 ORTHO05D012364 3.1e-06 56.6 105 33.3
Cc01_g05240 Coffea canephora HOM05D000009 ORTHO05D000008 4.0e-06 56.2 100 32.0
Duzib212G0657 Durio zibethinus HOM05D000009 ORTHO05D000008 4.0e-06 56.2 70 42.9
CAN.G710.21 Capsicum annuum HOM05D000009 ORTHO05D011077 5.2e-06 55.8 97 38.1
Cc00_g11540 Coffea canephora HOM05D000009 ORTHO05D000008 5.2e-06 55.8 115 32.2
FvH4_1g23030 Fragaria vesca HOM05D000009 ORTHO05D000008 5.2e-06 55.8 78 39.7
FAN27G1609 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.2e-06 55.8 81 40.7
FAN27G1789 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.2e-06 55.8 81 40.7
MBI09_g40720_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 5.2e-06 55.8 109 38.5
Prupe.6G243900 Prunus persica HOM05D000009 ORTHO05D000008 5.2e-06 55.8 89 34.8
MBI09_g47831_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 6.8e-06 55.5 109 38.5
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 6.8e-06 55.5 89 36.0
RcHm_v2.0_Chr1g0350501 Rosa chinensis HOM05D000009 ORTHO05D000008 6.8e-06 55.5 90 37.8
RcHm_v2.0_Chr2g0116281 Rosa chinensis HOM05D000009 ORTHO05D000008 6.8e-06 55.5 98 37.8
RcHm_v2.0_Chr2g0116651 Rosa chinensis HOM05D000009 ORTHO05D000008 6.8e-06 55.5 97 39.2
Ca_08437_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 8.9e-06 55.1 100 35.0
Duzib138G1463 Durio zibethinus HOM05D000009 ORTHO05D000008 8.9e-06 55.1 97 39.2
FAN14G2592 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.9e-06 55.1 78 39.7
Peaxi162Scf00970g00162 Petunia axillaris HOM05D000009 ORTHO05D000008 8.9e-06 55.1 94 36.2
Rhsim03G0042900 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.9e-06 55.1 46 58.7
RcHm_v2.0_Chr2g0117671 Rosa chinensis HOM05D000009 ORTHO05D003343 8.9e-06 55.1 96 34.4


User provided reference genes

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