Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047353 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 1.0e-24 115.9 58 100.0
CSS0037913 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 1.9e-18 95.1 92 60.9
CSS0047330 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 1.9e-18 95.1 92 60.9
Dinv22236 Davidia involucrata HOM05D000967 ORTHO05D000796 1.2e-17 92.4 92 58.7
Lj6g0015280 Lotus japonicus HOM05D007377 ORTHO05D001318 1.6e-17 92.0 93 58.1
MD03G1193900 Malus domestica HOM05D007377 ORTHO05D001318 1.6e-17 92.0 92 57.6
vmacro22317 Vaccinium macrocarpon HOM05D007377 ORTHO05D001318 2.7e-17 91.3 92 57.6
CSS0024685 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 6.0e-17 90.1 57 82.5
FvH4_3g23500 Fragaria vesca HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
Lalb_Chr15g0081741 Lupinus albus HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 58.7
Nitab4.5_0000984g0030 Nicotiana tabacum HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
Nitab4.5_0002826g0030 Nicotiana tabacum HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
Psat5g226320 Pisum sativum HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
RcHm_v2.0_Chr5g0041331 Rosa chinensis HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
Thecc.07G028800 Theobroma cacao HOM05D007377 ORTHO05D001318 6.0e-17 90.1 92 56.5
Rhsim06G0222900 Rhododendron simsii HOM05D007377 ORTHO05D001318 7.8e-17 89.7 92 56.5
Gohir.D13G141100 Gossypium hirsutum HOM05D007377 ORTHO05D001318 1.0e-16 89.4 92 56.5
Gorai.013G157900 Gossypium raimondii HOM05D007377 ORTHO05D001318 1.0e-16 89.4 92 56.5
Manes.03G136902 Manihot esculenta HOM05D007377 ORTHO05D001318 1.0e-16 89.4 92 55.4
CANSAT56G2083 Cannabis sativa HOM05D007377 ORTHO05D001318 1.3e-16 89.0 92 56.5
TPR.G32227 Trifolium pratense HOM05D007377 ORTHO05D001318 1.3e-16 89.0 92 56.5
arahy.Tifrunner.gnm1.ann1.A282I6 Arachis hypogaea HOM05D007377 ORTHO05D001318 1.7e-16 88.6 92 55.4
Ca_14764_v3 Cicer arietinum L. HOM05D001939 ORTHO05D002051 1.7e-16 88.6 92 55.4
arahy.Tifrunner.gnm1.ann1.T57YAK Arachis hypogaea HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 54.3
CSS0004760 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 2.3e-16 88.2 82 63.4
FAN11G2811 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 55.4
FAN21G0570 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 55.4
FAN25G2631 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 55.4
FAN25G3507 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 55.4
Glyma.08G321900 Glycine max HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 56.5
Glyma.18G090500 Glycine max HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 56.5
Sopen07g033120 Solanum pennellii HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 54.3
PGSC0003DMG400022302 Solanum tuberosum HOM05D007377 ORTHO05D001318 2.3e-16 88.2 92 54.3
Lalb_Chr15g0081671 Lupinus albus HOM05D007377 ORTHO05D001318 5.0e-16 87.0 92 56.5
Solyc07g064920.3 Solanum lycopersicum HOM05D007377 ORTHO05D001318 5.0e-16 87.0 92 53.3
Eucgr.F00655 Eucalyptus grandis HOM05D007377 ORTHO05D001318 6.6e-16 86.7 92 54.3
QL08p007408 Quercus lobata HOM05D007377 ORTHO05D001318 6.6e-16 86.7 92 56.5
TWI38G0075 Tripterygium wilfordii HOM05D007377 ORTHO05D001318 6.6e-16 86.7 92 54.3
Peaxi162Scf00235g00615 Petunia axillaris HOM05D007377 ORTHO05D001318 8.6e-16 86.3 81 59.3
CiPaw.12G133300 Carya illinoinensis HOM05D007377 ORTHO05D001318 1.1e-15 85.9 92 55.4
Potri.015G137600 Populus trichocarpa HOM05D007377 ORTHO05D001318 1.1e-15 85.9 92 55.4
Prupe.4G222800 Prunus persica HOM05D007377 ORTHO05D001318 1.5e-15 85.5 92 54.3
Duzib170G0659 Durio zibethinus HOM05D007377 ORTHO05D001318 2.5e-15 84.7 92 54.3
PGR083G0521 Punica granatum HOM05D007377 ORTHO05D001318 2.5e-15 84.7 92 51.1
TWI38G0751 Tripterygium wilfordii HOM05D007377 ORTHO05D001318 2.5e-15 84.7 91 53.8
Eucgr.F00653 Eucalyptus grandis HOM05D007377 ORTHO05D001318 3.3e-15 84.3 92 52.2
Nn6g34450 Nelumbo nucifera HOM05D007377 ORTHO05D001318 3.3e-15 84.3 92 54.3
Phvul.006G048200 Phaseolus vulgaris HOM05D007377 ORTHO05D001318 3.3e-15 84.3 92 53.3
COL.COLO4_09723 Corchorus olitorius HOM05D007377 ORTHO05D001318 4.3e-15 84.0 92 53.3
DCAR_030723 Daucus carota HOM05D007377 ORTHO05D001318 5.6e-15 83.6 92 53.3
GSVIVG01037716001 Vitis vinifera HOM05D007377 ORTHO05D001318 9.5e-15 82.8 92 53.3
Cpa.g.sc284.9 Carica papaya HOM05D007377 ORTHO05D001318 1.2e-14 82.4 92 52.2
CsaV3_4G030840 Cucumis sativus L. HOM05D007377 ORTHO05D001318 1.2e-14 82.4 92 54.3
HanXRQChr03g0076811 Helianthus annuus HOM05D007377 ORTHO05D001318 1.2e-14 82.4 92 53.3
CDE02G1939 Ceratophyllum demersum HOM05D007377 ORTHO05D001318 1.6e-14 82.0 92 51.1
CAN.G337.62 Capsicum annuum HOM05D007377 ORTHO05D001318 2.1e-14 81.6 92 52.2
PSO210G4797 Papaver somniferum HOM05D007377 ORTHO05D001318 2.1e-14 81.6 91 51.6
CARHR234430 Cardamine hirsuta HOM05D007377 ORTHO05D001318 2.8e-14 81.3 92 52.2
MELO3C014274.2 Cucumis melo HOM05D007377 ORTHO05D001318 2.8e-14 81.3 92 53.3
Ciclev10010012m.g Citrus clementina HOM05D007377 ORTHO05D001318 3.6e-14 80.9 92 51.1
Aa31LG5G12120 Aethionema arabicum HOM05D007377 ORTHO05D001318 4.7e-14 80.5 92 52.2
MBI19_g29450_MAGBIO Magnolia biondii HOM05D007377 ORTHO05D001318 4.7e-14 80.5 40 90.0
ClCG04G002280 Citrullus lanatus HOM05D007377 ORTHO05D001318 8.1e-14 79.7 92 52.2
Thhalv10026656m.g Eutrema salsugineum HOM05D007377 ORTHO05D001318 8.1e-14 79.7 92 50.0
Carub.0007s1403 Capsella rubella HOM05D007377 ORTHO05D001318 1.4e-13 79.0 92 50.0
Aqoxy1G04156 Aquilegia oxysepala HOM05D007377 ORTHO05D001318 1.8e-13 78.6 91 50.5
Oeu013118.1 Olea europaea HOM05D007377 ORTHO05D001318 2.3e-13 78.2 92 51.1
AL7G26030 Arabidopsis lyrata HOM05D007377 ORTHO05D001318 3.1e-13 77.8 92 51.1
BcaB03g12510 Brassica carinata HOM05D007377 ORTHO05D001318 3.1e-13 77.8 92 50.0
Medtr3g054160 Medicago truncatula HOM05D007377 ORTHO05D001318 4.0e-13 77.4 39 89.7
Sc26g0002620 Simmondsia chinensis HOM05D007377 ORTHO05D001318 4.0e-13 77.4 39 89.7
A01p18050 Brassica napus HOM05D007377 ORTHO05D001318 5.2e-13 77.0 92 50.0
BraA01t01760Z Brassica rapa HOM05D007377 ORTHO05D001318 5.2e-13 77.0 92 50.0
Cc05_g14250 Coffea canephora HOM05D007377 ORTHO05D001318 5.2e-13 77.0 92 50.0
ECA240G1072 Erigeron canadensis HOM05D007377 ORTHO05D001318 5.2e-13 77.0 92 50.0
Sp7g24790 Schrenkiella parvula HOM05D007377 ORTHO05D001318 5.2e-13 77.0 92 50.0
AT4G26810 Arabidopsis thaliana HOM05D007377 ORTHO05D001318 6.8e-13 76.6 92 50.0
A08p20700 Brassica napus HOM05D007377 ORTHO05D001318 6.8e-13 76.6 90 50.0
BraA08t34024Z Brassica rapa HOM05D007377 ORTHO05D001318 6.8e-13 76.6 90 50.0
BcaC07g38252 Brassica carinata HOM05D007377 ORTHO05D001318 8.9e-13 76.3 90 50.0
C08p09980 Brassica napus HOM05D007377 ORTHO05D001318 8.9e-13 76.3 90 50.0
BolC8t48675H Brassica oleracea HOM05D007377 ORTHO05D001318 8.9e-13 76.3 90 50.0
C01p23010 Brassica napus HOM05D007377 ORTHO05D001318 1.2e-12 75.9 92 48.9
BolC1t02235H Brassica oleracea HOM05D007377 ORTHO05D001318 1.2e-12 75.9 92 48.9
CDE11G1083 Ceratophyllum demersum HOM05D007377 ORTHO05D001318 1.5e-12 75.5 39 84.6
Migut.M01714 Erythranthe guttata HOM05D007377 ORTHO05D001318 1.5e-12 75.5 92 47.8
THA.LOC104817679 Tarenaya hassleriana HOM05D007377 ORTHO05D001318 1.5e-12 75.5 39 89.7
TAR626G1964 Trochodendron aralioides HOM05D007377 ORTHO05D001318 1.5e-12 75.5 39 87.2
Cfa020282 Carpinus fangiana HOM05D053328 ORTHO05D001318 2.6e-12 74.7 42 83.3
SHI26574 Sapria himalayana HOM05D007377 ORTHO05D001318 2.9e-11 71.2 39 79.5
SalBow2G0902 Salvia bowleyana HOM05D007377 ORTHO05D001318 3.7e-11 70.9 92 44.6
Hund23200 Selenicereus undatus HOM05D007377 ORTHO05D001318 3.7e-11 70.9 39 82.1
EL10Ac4g07701 Beta vulgaris HOM05D007377 ORTHO05D001318 4.9e-11 70.5 39 79.5
Lsat_1_v5_gn_9_93280 Lactuca sativa HOM05D007377 ORTHO05D001318 6.4e-11 70.1 39 82.1
Sed0005824 Sechium edule HOM05D007377 ORTHO05D001318 8.3e-11 69.7 39 82.1
SGA_v2.0_scaffold19G08742 Striga asiatica HOM05D007377 ORTHO05D001318 8.3e-11 69.7 39 76.9
SGA_v2.0_scaffold79G25647 Striga asiatica HOM05D007377 ORTHO05D001318 8.3e-11 69.7 39 76.9
MSTRG.6957 Avicennia marina HOM05D007377 ORTHO05D001318 9.2e-10 66.2 39 76.9
Os09g0133000 Oryza sativa ssp. japonica HOM05D007377 ORTHO05D001318 9.2e-10 66.2 39 66.7
Sabra15G0149000 Salix brachista HOM05D007377 ORTHO05D001318 2.3e-08 61.6 82 47.6
unitig_46.g18284 Utricularia gibba HOM05D007377 ORTHO05D001318 4.7e-06 53.9 39 59.0


User provided reference genes

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