Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.5e-47 190.3 89 100.0
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.5e-30 136.0 86 76.7
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.8e-20 100.5 68 63.2
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.8e-19 96.7 80 57.5
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.8e-17 92.4 68 60.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.4e-17 92.0 64 64.1
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.1e-17 91.7 78 56.4
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.1e-17 91.3 79 57.0
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.5e-16 88.2 68 57.4
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.9e-16 87.4 68 52.9
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 3.3e-14 81.6 63 61.9
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.5e-14 80.1 67 55.2
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 1.2e-13 79.7 65 52.3
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.8e-12 73.9 51 66.7
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.1e-09 66.6 45 60.0
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.1e-09 65.1 58 51.7
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.1e-09 64.7 47 63.8
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 5.4e-09 64.3 44 63.6
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 2.7e-08 62.0 63 44.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 3.5e-08 61.6 64 43.8
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.5e-08 61.2 47 61.7
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.9e-08 60.8 73 43.8
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.0e-07 60.1 71 42.3
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 1.5e-06 56.2 48 47.9
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 3.3e-06 55.1 50 42.0
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.3e-06 55.1 50 42.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-06 54.7 73 34.2
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 4.3e-06 54.7 57 43.9
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 4.3e-06 54.7 57 43.9
Sc04g0002380 Simmondsia chinensis HOM05D009209 ORTHO05D011057 7.3e-06 53.9 62 40.3


User provided reference genes

Program Settings