Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 0.0e+00 1324.7 677 100.0
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 4.2e-311 1070.8 677 80.5
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 1.2e-305 1052.7 678 78.3
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 6.0e-286 987.3 634 77.8
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 8.7e-277 956.8 680 70.6
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 1.8e-274 949.1 697 70.2
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 6.9e-274 947.2 675 71.6
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 2.0e-273 945.7 675 71.3
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.9e-271 939.1 671 69.3
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.3e-269 932.9 674 68.8
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 2.1e-267 925.6 674 69.0
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 3.1e-266 921.8 684 68.1
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.7e-262 908.7 679 66.9
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 2.3e-261 905.6 648 68.8
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 9.7e-260 900.2 680 66.8
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 1.6e-259 899.4 671 66.2
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.8e-259 898.7 680 66.6
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 6.3e-259 897.5 680 66.3
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 1.8e-258 896.0 681 67.1
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 2.4e-258 895.6 648 67.4
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 3.4e-257 891.7 670 69.1
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 3.2e-255 885.2 675 66.8
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 4.2e-255 884.8 674 65.7
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 7.2e-255 884.0 679 65.4
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 9.4e-255 883.6 674 66.8
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.4e-253 879.8 674 65.3
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.4e-253 879.8 680 65.7
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 3.0e-253 878.6 674 65.3
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 3.9e-253 878.2 669 68.0
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 5.1e-253 877.9 675 66.2
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.4e-252 874.8 674 65.3
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 7.4e-252 874.0 666 66.4
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 1.7e-251 872.8 675 65.0
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 2.8e-251 872.1 668 66.5
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 1.1e-250 870.2 666 66.1
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 3.4e-249 865.1 680 64.1
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 1.7e-248 862.8 676 66.7
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 3.8e-248 861.7 677 66.8
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 8.5e-248 860.5 700 63.6
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 2.5e-247 859.0 671 66.2
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 1.6e-246 856.3 675 64.3
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 2.7e-246 855.5 666 64.9
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 2.7e-246 855.5 669 66.7
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 2.7e-246 855.5 676 64.8
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 6.1e-246 854.4 675 63.9
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.4e-245 853.2 675 63.9
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.3e-245 852.4 635 67.2
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 2.3e-245 852.4 644 67.2
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 3.0e-245 852.0 670 66.0
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 5.2e-245 851.3 679 66.1
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 9.7e-244 847.0 692 64.2
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 9.7e-244 847.0 669 64.1
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 1.1e-242 843.6 674 66.2
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 5.3e-242 841.3 645 66.2
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.0e-240 837.0 674 62.9
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.7e-240 836.3 678 63.3
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.7e-240 836.3 667 66.3
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 5.0e-240 834.7 646 65.3
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 4.2e-239 831.6 680 64.1
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 7.2e-239 830.9 673 63.2
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.2e-238 830.1 665 63.9
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.6e-238 829.7 673 62.7
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 8.0e-238 827.4 640 64.2
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 6.7e-237 824.3 668 62.7
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 1.2e-236 823.5 674 63.1
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 2.6e-236 822.4 679 63.8
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 2.6e-236 822.4 675 62.5
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 2.6e-236 822.4 675 64.1
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 5.7e-236 821.2 671 62.6
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 5.7e-236 821.2 668 63.2
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 7.5e-236 820.8 669 63.8
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 7.5e-236 820.8 681 62.8
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 1.7e-235 819.7 677 63.2
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 1.4e-234 816.6 674 61.6
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 1.4e-234 816.6 671 65.0
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 3.1e-234 815.5 676 61.2
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.1e-234 815.1 666 63.5
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 5.3e-234 814.7 589 67.9
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.9e-232 808.9 676 61.7
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 5.0e-232 808.1 674 62.0
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 1.5e-231 806.6 645 63.7
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 5.5e-231 804.7 644 63.0
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.0e-229 800.4 706 62.7
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 1.8e-229 799.7 677 61.3
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 1.8e-229 799.7 601 66.9
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 2.0e-228 796.2 676 61.2
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 4.4e-228 795.0 668 61.2
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 3.7e-227 792.0 645 62.9
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 1.4e-226 790.0 645 62.9
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.6e-225 786.6 589 67.1
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 5.0e-224 781.6 673 60.9
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 6.5e-224 781.2 587 65.4
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.9e-223 779.6 645 62.3
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 5.5e-223 778.1 674 60.2
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 6.1e-222 774.6 645 62.2
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 8.3e-219 764.2 678 60.2
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 8.9e-213 744.2 682 58.9
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 1.5e-204 716.8 638 56.3
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 8.6e-200 701.0 604 59.4
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 2.6e-196 689.5 573 60.9
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 1.6e-190 670.2 548 60.8
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 7.6e-180 634.8 566 58.0
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 1.3e-176 624.0 501 62.1
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.1e-159 567.8 677 51.3
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.5e-159 567.4 509 59.3
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.5e-156 555.8 606 50.5
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 6.5e-155 552.0 704 45.5
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 4.6e-153 545.8 590 52.9
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 1.8e-144 517.3 433 60.0
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 7.9e-137 491.9 458 55.0
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.2e-132 478.0 394 66.0
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 3.7e-126 456.4 638 41.8
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 3.2e-122 443.4 801 37.0
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 6.5e-115 419.1 393 54.5
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 1.8e-101 374.4 518 42.5
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.5e-90 338.2 209 74.2
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 3.1e-80 303.9 289 57.8
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.5e-74 285.0 324 49.1
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 3.3e-74 283.9 226 61.5
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.8e-72 278.1 205 68.3
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 4.6e-68 263.5 634 32.3
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 1.1e-66 258.8 203 62.1
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 1.7e-62 245.0 404 42.3
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 3.1e-56 224.2 657 29.8
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 1.2e-55 222.2 680 30.3
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 1.7e-54 218.4 646 28.9
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.6e-49 201.8 141 74.5
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 1.3e-46 192.2 175 61.1
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 1.2e-44 185.7 121 77.7
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.3e-43 182.2 274 43.8
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.9e-43 180.6 274 43.1
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 4.3e-42 177.2 148 57.4
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 9.3e-37 159.5 175 51.4
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.1e-32 146.0 279 37.3
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 5.9e-31 140.2 140 55.7
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.0e-30 139.4 198 38.4
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 1.7e-30 138.7 117 57.3
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.6e-28 132.1 259 36.7
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.6e-28 132.1 259 36.7
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.6e-28 130.6 259 36.3
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.6e-28 130.6 259 36.3
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 7.9e-28 129.8 92 76.1
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.0e-27 127.9 232 39.2
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 3.3e-26 124.4 164 46.3
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.7e-23 113.2 164 45.7
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.0e-22 112.8 321 31.5
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.3e-22 112.5 164 45.7
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.7e-22 112.1 164 45.1
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 3.8e-22 110.9 109 52.3
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 1.4e-19 102.4 70 77.1
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 1.1e-18 99.4 70 75.7
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 9.1e-16 89.7 70 61.4
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 3.5e-15 87.8 70 60.0
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 2.3e-11 75.1 50 72.0
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 1.4e-08 65.9 40 70.0


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